| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_1260 |
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| Symbol | |
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| ID | 8709755 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | + |
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| Start bp | 1506370 |
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| End bp | 1507212 |
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| Gene Length | 843 bp |
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| Protein Length | 280 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 646483348 |
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| Product | lipase/esterase family protein |
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| Protein accession | YP_003374450 |
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| Protein GI | 283783696 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0657] Esterase/lipase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.00119975 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAGATTA TAAATCAGAA AATAAAAAGT ATAGATGGAA GCGATGCGCA GCTTATTGGG
TATATTTTAG ACGATAATTT AGATAGCAAA GGCTTGCAAA ACCGTCCTGC AATTCTAATT
TTGCCAGGCG GTGGCTTCTT GCGCGTATCG AATCGTGAGG CAGAGCCTGT TGCCATGAAG
TTTGCTGCAG AAGGATTCCA CACTTTTGTG TTGCGATACT CGCTTACTCC AAGCACATAC
CCAACTCAGC TTTTAGAAGC AGCAGAAGCG ATGAGCTTAA TTCGCAAAAA CGCAAAAGAA
TGGCACGTAG ATGCGCAAAA AGTTGCAATT ATTGGATTCT CCGCTGGAGG GCATGTGGCT
GCAAACCTTG CAACTAGCGT TAGCGACGAA GTTGAGGAAG CAAACGGGTA TGCTGCTGAT
GACGTGCGAC CAAATGCTCT TATGCTCGCA TATCCTGTTA TTTCTGCTGG GAAATATGCG
CATAAGCCAA CGTTCGATCG TCTATTTGGA GAAGTTAGCA ACGAAGAGCG AACTGAACTT
GTCAATAAAC TTTCGCTGGA AAATCACGTG GATCGTAAAA CTCCACCTGT ATTTGTATGG
CAAACCATTA CTGATCAAAC AGTTCCAGTA GAAAATTCAA TAATGTTTGT GAACGCTTGC
GTTGAAGCTG GAGTAAGTGT TGAAGCGCAC CTGTTCCCTA AAGGACCTCA CGGCTTAGCT
TTGGCAGTTA AAGAAACAGC AAAACGCGAC GAAAACGGAA ATGTGCTTAC TGAATTTGTT
CAGCCAGAAG TTCAGCAGTG GGTTAAGCTT GCTTGCGATT GGTTGCATCG CACTTTTGCG
TAA
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| Protein sequence | MKIINQKIKS IDGSDAQLIG YILDDNLDSK GLQNRPAILI LPGGGFLRVS NREAEPVAMK
FAAEGFHTFV LRYSLTPSTY PTQLLEAAEA MSLIRKNAKE WHVDAQKVAI IGFSAGGHVA
ANLATSVSDE VEEANGYAAD DVRPNALMLA YPVISAGKYA HKPTFDRLFG EVSNEERTEL
VNKLSLENHV DRKTPPVFVW QTITDQTVPV ENSIMFVNAC VEAGVSVEAH LFPKGPHGLA
LAVKETAKRD ENGNVLTEFV QPEVQQWVKL ACDWLHRTFA
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