| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_1246 |
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| Symbol | |
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| ID | 8710028 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | - |
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| Start bp | 1485518 |
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| End bp | 1486333 |
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| Gene Length | 816 bp |
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| Protein Length | 271 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 646483334 |
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| Product | hypothetical protein |
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| Protein accession | YP_003374436 |
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| Protein GI | 283783682 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00037979 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGAAAATG GTGCAGAAAG CATACTTAAT TGCAACTCGA TAAAACTCGC TAATCTACCT
GATTTTGGTG AAGTAGAGAA ATTGCATAGT GCAACTGCAC CATCTTCTGC TGCTTATGAG
CTTATTCACG GTCATTGTGT TGTAATCTCA ACAATTGCTT GGCAAATTGC TCATCATTGC
AATATGCTTT TGTCCGCTGA AAATCGTGCT GCTCAAATGA GTGGAACTTT GCGTAAGCGT
GCTGAAATAG CAAAAAATTG CCTTCAGGAG CTTGTCGGAG ATAGTTATGC AATATTACCT
GCGGTTAGTG ATGGCTTAGC TCCAAAACAG TATATTGATG AATACGCAGC TTTAATAGGT
GGATTGTTGC ACGATATTGG CACGTATTTT GTGCTTGAAA GTGATGGCAG TAGTAACGCT
GGTGGCATAT TACGCTTTGA TGGACCGAAT TATATTTTGC ATGGTTTGCG CGGATATAAA
TATTTAATTG ATAATGGTTT TAGTGAGGAT GCTGCGCAAT TTGCGCGCAA CCATACTGGA
GTTGGCTTAA CTCGAGAGCA AGTTGTTGCG CAAAATTTGC CTCTTCCTGC TGAAGACTAT
ATTCCGCAAA CAGTTGAGCA AGAAATTGTT ATGGTTGCGG ATAAATATAA CAGCAAATCG
ATACCTCCTC GTTTTTTGAC AGTTGATTCT TATCGTCGCA AGGCTGCGCG ATTTGGTGAA
GACAATGCTA ATCGGTGGAT GCAATTAGTT ACGAAATATG GTGAGCCAGA TATTGCAGGC
CTGGCAGAAA TCTTTAATAT GCGTGTTGAT GCGTGA
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| Protein sequence | MENGAESILN CNSIKLANLP DFGEVEKLHS ATAPSSAAYE LIHGHCVVIS TIAWQIAHHC
NMLLSAENRA AQMSGTLRKR AEIAKNCLQE LVGDSYAILP AVSDGLAPKQ YIDEYAALIG
GLLHDIGTYF VLESDGSSNA GGILRFDGPN YILHGLRGYK YLIDNGFSED AAQFARNHTG
VGLTREQVVA QNLPLPAEDY IPQTVEQEIV MVADKYNSKS IPPRFLTVDS YRRKAARFGE
DNANRWMQLV TKYGEPDIAG LAEIFNMRVD A
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