| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_1228 |
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| Symbol | |
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| ID | 8709345 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | - |
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| Start bp | 1459698 |
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| End bp | 1460558 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 646483316 |
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| Product | hypothetical protein |
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| Protein accession | YP_003374421 |
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| Protein GI | 283783667 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.0000000185797 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCTAATG CATCAAATAT TAAAAAAGAT ATTATTACAG CAAAAGGCTT TACAATTCAG
GTTTATACGG AAGATTTTAG GAATGATTAC GTTAGTTTAA CCGATATTGC GAGATATAAA
AACAAAGAAG AGCCTAAAGA TGTTGTTAAA AACTGGCTGA GAGTGAAGAA TACTATTGAG
TTCTTGGGAT TGTGGGAGAG TATTAACAAT CCTAATTTTA AAGGGGTCGA ATTCGACTCC
TTTAAGAATG AGGCTGGTTC TAATGCTTTT ACTTTATCTT CTAAAAGATG GGTAGAATCA
ACAAATGCTA TTGGCATAGT TTCCAAATCT GGTAAGAATG GCGGAACTTA CGCTCATAAA
GATATAGCAT TTAAGTTTGC GGCTTGGATC TCAGCAGAAT TTGAACTATA TATTATCAAA
GATTATCAAA GACTTAAATC TGATGAGGGT TCCAGGCTTT CGTTGAATTG GAATTTGAAC
CGTGAGATTT CGAAGATTAA TTACAAGATT CATACGGATG CTATTAAAGA ATATTTGTTG
AAGGATTTGA CTTCTGAGCA GTTGATGTAT AAGTATGCAA ATGAAGCAGA TTTGTTAAAT
GTTGCATTGT TTAATAAGAC TGCTAAGCAA TGGAGAGACG CAAATCCTAA GTCAAAAGGA
AACATTCGAG ACGAGGCGAG TATTAATGAA CTTCTGGTAT TGGCGAATAT GGAAAGCTAT
AATGCTGTTT TGATTTCTAA GGGTTTACCA CAGGAAGATC GAATGGTGGA ACTTAGAAAT
TTGGCGCGAG CGCAGATTTT ATCCCTTGAG AATTTGAATA ATTCTGGAAT AAAGAGTTTG
GATTCCGTGT TAAAAAGTTG A
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| Protein sequence | MSNASNIKKD IITAKGFTIQ VYTEDFRNDY VSLTDIARYK NKEEPKDVVK NWLRVKNTIE
FLGLWESINN PNFKGVEFDS FKNEAGSNAF TLSSKRWVES TNAIGIVSKS GKNGGTYAHK
DIAFKFAAWI SAEFELYIIK DYQRLKSDEG SRLSLNWNLN REISKINYKI HTDAIKEYLL
KDLTSEQLMY KYANEADLLN VALFNKTAKQ WRDANPKSKG NIRDEASINE LLVLANMESY
NAVLISKGLP QEDRMVELRN LARAQILSLE NLNNSGIKSL DSVLKS
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