Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HMPREF0424_1221 |
Symbol | proB |
ID | 8709582 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Gardnerella vaginalis 409-05 |
Kingdom | Bacteria |
Replicon accession | NC_013721 |
Strand | - |
Start bp | 1450341 |
End bp | 1451486 |
Gene Length | 1146 bp |
Protein Length | 381 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 646483309 |
Product | glutamate 5-kinase |
Protein accession | YP_003374414 |
Protein GI | 283783660 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0263] Glutamate 5-kinase |
TIGRFAM ID | [TIGR01027] glutamate 5-kinase |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.0000000210818 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAATAATC CAGAAATTGA GCTTACCGAA GATGGGGTTC GGTGTTCAAT TCGTGAGGCG CGCACAATCG TTGTAAAAGT TGGCTCAAGC TCACTTACGA GCGCGTCTGG GCAGCTGGAT GTGCAAAAGT TGCGCGCTCT TGTGACTGCA ATAAGTCACG CGCAAATGCA AGGTGCTCGC ATTGTGCTTG TGTCTTCTGG TGCAATTGCA GCTGGATTTG GTTTGCTCGG CTTTAATGAG CGTCCTAAAG ATGTGCCAAC TCAGCAGGCA ACAGCTTCAG TTGGTCAAGG ATTGCTTATG GCTCAATACG AAGCAGCATT TTCGCAATTT GGTTTCAGAG TCGGGCAAAT GCTTCTTACT GCGGACGTTA CTATTTCGCC GTCTCGCTAC CGTAACGCTC AGCGCACAAT GCTGCGGCTT CTTGAACTTG GCGTAATTCC AATCGTAAAC GAAAATGATG CGCTTTCTAG CAACGAAATT CGATTCGGTG ACAACGACAG ACTTGCAGCA TTAGTTGCGA ATATTGTGCG TGCAGAAGCG CTTGTGCTGC TTACAGATGT GGATTCGCTT TATACTGCGC CGCCTAGCGA ACCTGGCGCA AAACGAGTGA GCTTTGTGCC AGATGTGACG CGTGCTTTAG AAGAAGTGAA AGTTGGCGCA AGCGTTTCGG GTGTAGGTAC TGGGGGTATG GTGACGAAGC TGGAAGCCGC GCATGTGGCG GCAGTTTCGG GTATTCCAAC CGTGCTTACT TGCGCTGGAA ATGCTGGTCC GGCACTGGCT GGAGATGCTG TTGGCACTGT GTTTGCGCCG GTGCATACGC GCGATTCTTC TAGGCGACTT TGGATTGGGT TTGCGTCTAA TCCGCACGGA ACTTTGGTGG TTGATTCTGG TGCTGCTAAA GCTGTGCGCG GCGGACGTGC GAGCCTTCTT GCGGCTGGTA TTGTTGGTGT GCGCGGCGAG TTTTCGGCGA CGGATCCTGT GTGGATTGAC GATGAGCAGG GTAACCATTT GGCTAAGGGT TTAGTGGCTT TTGACGCGGA GGAAATTCCG GAGATTATGG GGCGTACGAG CGATGAGCTT GAAGAATCAC TCGGCCGTCA GTATGCGCAT CCGGTGGTTC ATCGCGATAA TCTCGTGCTT GTGTAA
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Protein sequence | MNNPEIELTE DGVRCSIREA RTIVVKVGSS SLTSASGQLD VQKLRALVTA ISHAQMQGAR IVLVSSGAIA AGFGLLGFNE RPKDVPTQQA TASVGQGLLM AQYEAAFSQF GFRVGQMLLT ADVTISPSRY RNAQRTMLRL LELGVIPIVN ENDALSSNEI RFGDNDRLAA LVANIVRAEA LVLLTDVDSL YTAPPSEPGA KRVSFVPDVT RALEEVKVGA SVSGVGTGGM VTKLEAAHVA AVSGIPTVLT CAGNAGPALA GDAVGTVFAP VHTRDSSRRL WIGFASNPHG TLVVDSGAAK AVRGGRASLL AAGIVGVRGE FSATDPVWID DEQGNHLAKG LVAFDAEEIP EIMGRTSDEL EESLGRQYAH PVVHRDNLVL V
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