Gene HMPREF0424_1221 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHMPREF0424_1221 
SymbolproB 
ID8709582 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGardnerella vaginalis 409-05 
KingdomBacteria 
Replicon accessionNC_013721 
Strand
Start bp1450341 
End bp1451486 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content52% 
IMG OID646483309 
Productglutamate 5-kinase 
Protein accessionYP_003374414 
Protein GI283783660 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0263] Glutamate 5-kinase 
TIGRFAM ID[TIGR01027] glutamate 5-kinase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000210818 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAATAATC CAGAAATTGA GCTTACCGAA GATGGGGTTC GGTGTTCAAT TCGTGAGGCG 
CGCACAATCG TTGTAAAAGT TGGCTCAAGC TCACTTACGA GCGCGTCTGG GCAGCTGGAT
GTGCAAAAGT TGCGCGCTCT TGTGACTGCA ATAAGTCACG CGCAAATGCA AGGTGCTCGC
ATTGTGCTTG TGTCTTCTGG TGCAATTGCA GCTGGATTTG GTTTGCTCGG CTTTAATGAG
CGTCCTAAAG ATGTGCCAAC TCAGCAGGCA ACAGCTTCAG TTGGTCAAGG ATTGCTTATG
GCTCAATACG AAGCAGCATT TTCGCAATTT GGTTTCAGAG TCGGGCAAAT GCTTCTTACT
GCGGACGTTA CTATTTCGCC GTCTCGCTAC CGTAACGCTC AGCGCACAAT GCTGCGGCTT
CTTGAACTTG GCGTAATTCC AATCGTAAAC GAAAATGATG CGCTTTCTAG CAACGAAATT
CGATTCGGTG ACAACGACAG ACTTGCAGCA TTAGTTGCGA ATATTGTGCG TGCAGAAGCG
CTTGTGCTGC TTACAGATGT GGATTCGCTT TATACTGCGC CGCCTAGCGA ACCTGGCGCA
AAACGAGTGA GCTTTGTGCC AGATGTGACG CGTGCTTTAG AAGAAGTGAA AGTTGGCGCA
AGCGTTTCGG GTGTAGGTAC TGGGGGTATG GTGACGAAGC TGGAAGCCGC GCATGTGGCG
GCAGTTTCGG GTATTCCAAC CGTGCTTACT TGCGCTGGAA ATGCTGGTCC GGCACTGGCT
GGAGATGCTG TTGGCACTGT GTTTGCGCCG GTGCATACGC GCGATTCTTC TAGGCGACTT
TGGATTGGGT TTGCGTCTAA TCCGCACGGA ACTTTGGTGG TTGATTCTGG TGCTGCTAAA
GCTGTGCGCG GCGGACGTGC GAGCCTTCTT GCGGCTGGTA TTGTTGGTGT GCGCGGCGAG
TTTTCGGCGA CGGATCCTGT GTGGATTGAC GATGAGCAGG GTAACCATTT GGCTAAGGGT
TTAGTGGCTT TTGACGCGGA GGAAATTCCG GAGATTATGG GGCGTACGAG CGATGAGCTT
GAAGAATCAC TCGGCCGTCA GTATGCGCAT CCGGTGGTTC ATCGCGATAA TCTCGTGCTT
GTGTAA
 
Protein sequence
MNNPEIELTE DGVRCSIREA RTIVVKVGSS SLTSASGQLD VQKLRALVTA ISHAQMQGAR 
IVLVSSGAIA AGFGLLGFNE RPKDVPTQQA TASVGQGLLM AQYEAAFSQF GFRVGQMLLT
ADVTISPSRY RNAQRTMLRL LELGVIPIVN ENDALSSNEI RFGDNDRLAA LVANIVRAEA
LVLLTDVDSL YTAPPSEPGA KRVSFVPDVT RALEEVKVGA SVSGVGTGGM VTKLEAAHVA
AVSGIPTVLT CAGNAGPALA GDAVGTVFAP VHTRDSSRRL WIGFASNPHG TLVVDSGAAK
AVRGGRASLL AAGIVGVRGE FSATDPVWID DEQGNHLAKG LVAFDAEEIP EIMGRTSDEL
EESLGRQYAH PVVHRDNLVL V