| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_1212 |
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| Symbol | |
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| ID | 8708970 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | - |
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| Start bp | 1438703 |
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| End bp | 1439722 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 646483300 |
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| Product | hypothetical protein |
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| Protein accession | YP_003374406 |
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| Protein GI | 283783652 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.000000149862 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGTAGAGG GGAATAAAAA TCTAATTATC GCTGACTCTA AAAACGCGTC TGTTGGAATG
ATAATAGACG CTGAAACAAT AAAAGAGAAA ATCTACAACA TTCGTAATCA AAAAGTCATG
CTTGATTTTG AGCTTGCTGA AATATATGGG TATACTACGG CAAGATTCAA CGAGCAGGTA
AAAAATAACA TAGAAAAGTT TGATGATGAC TTTATGTTTC AGCTAACTGC TGATGAGTTC
AAAAACTTGA TGTCGAAAAA TTCTACATCA AGTTGGGGTG GTCGCAGAAA GCTTCCATAT
GCTTTTACGG AGCAAGGTAT TTATATGCTC ATGACTGTGT TAAGAGGCGA ACTTGCCATA
ATTCAGTCGA AAGCGCTTAT TAGAACCTTT AAGCAAATGA AGGATTATAT TGTTGAAAAT
AAGGATTTTA TTGGCGCGAA GGAATTAGCT AAGCTTGCGA TTCAAACGAA TCAGAATACT
AATGATATAG CGGAAATAAA ATCTCAAATG GCAACGAAGG AAGATTTTAA TAAGGTAATG
GATAATTTTA TTAATCCAGA TTCGTATAAA CATTTTCTTC TTATGGACGG CAATAAAATA
GAAGCGGATC TTGCGTATTG CAAAATATAT AAATCAGCTA AGAAAAGCAT TTACGTTGTT
GATAATTATA TTGGTCTTAA AACATTGGAA CTATTACGGT TTGCTGGTGA AGGGGTTGAA
ATCGTAGTTT TTAGTGATAA CGCTAGGAGC AAGAATATGC TTACGGAAAG CATGTTGGGT
GATTTTGTAA GCGATTGTCC TGGTGTTGAT TTGAAGTTTA AGACTGCTGG CAGAAAGTAT
CACGATAGGT ATGTGGTTAT AGATTATGGA ACGGATGATG AGGCTGTTTA CGTTTGTGGC
GCTTCGTCGA AAGATGCTGG CGGCAAAATT TCGACTATTA CGCGAATAGA GTCTTTGAAT
TTGCGCTTGT ATCATGCGAT GTTTGATGAG TTGTTAAAGA ATCCTGAGTT AGAGTTTTAA
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| Protein sequence | MVEGNKNLII ADSKNASVGM IIDAETIKEK IYNIRNQKVM LDFELAEIYG YTTARFNEQV
KNNIEKFDDD FMFQLTADEF KNLMSKNSTS SWGGRRKLPY AFTEQGIYML MTVLRGELAI
IQSKALIRTF KQMKDYIVEN KDFIGAKELA KLAIQTNQNT NDIAEIKSQM ATKEDFNKVM
DNFINPDSYK HFLLMDGNKI EADLAYCKIY KSAKKSIYVV DNYIGLKTLE LLRFAGEGVE
IVVFSDNARS KNMLTESMLG DFVSDCPGVD LKFKTAGRKY HDRYVVIDYG TDDEAVYVCG
ASSKDAGGKI STITRIESLN LRLYHAMFDE LLKNPELEF
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