| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_1204 |
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| Symbol | |
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| ID | 8709243 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | - |
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| Start bp | 1431826 |
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| End bp | 1432287 |
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| Gene Length | 462 bp |
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| Protein Length | 153 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 646483293 |
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| Product | hypothetical protein |
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| Protein accession | YP_003374399 |
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| Protein GI | 283783645 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3600] Uncharacterized phage-associated protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.000000807308 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACAACAA TCTTTAACGT GGCATCGTAC ATCCTTGATA TTACTGGAAC TATTACCACT
ATGAAGCTGC AGAAGCTAGC TTACTATTCG CAAGCGTATT CTTTGGCTGC TACTGGGCAT
CCGTTATTTA ACGAGGATTT TCAGGCATGG AGGAATGGTC CTGTTTGCCC GGAATTATTT
GCATTGCATC GTGGGAAGTT TTTGATTCGT AAAGGTGAGC TTGTAATTCC CAATACTGAG
AAGCTTCAGG ATAATTCTTT AACAGATGTC CAAAAGATTC TTGTGGAAAA GGTATGCGAA
AAGTTTGCTG GATATTCTGG TAGTGATTTG AGTGCTATGA CACATAGTGA AGATCCATGG
AAGAATGCTT ATGATGCTAC TAATAGTTCG GCAATATGCG TTCAAAAAAT TACTAAAGAT
TCTTTGAAAG ATTACTATTC AACTCATAAT TTTTTGCGGT AA
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| Protein sequence | MTTIFNVASY ILDITGTITT MKLQKLAYYS QAYSLAATGH PLFNEDFQAW RNGPVCPELF
ALHRGKFLIR KGELVIPNTE KLQDNSLTDV QKILVEKVCE KFAGYSGSDL SAMTHSEDPW
KNAYDATNSS AICVQKITKD SLKDYYSTHN FLR
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