| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_1198 |
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| Symbol | |
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| ID | 8709366 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | - |
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| Start bp | 1422482 |
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| End bp | 1424128 |
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| Gene Length | 1647 bp |
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| Protein Length | 548 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 646483287 |
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| Product | carboxyl transferase domain protein |
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| Protein accession | YP_003374393 |
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| Protein GI | 283783639 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG4799] Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.000462076 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGTACTT TAGCAAAAGA AAAGTCTGAA ATCTCTGAAA CTTCAGCGAA AACAGTTAAT
AACTCTTCTG TTAATAGCTC TGCTGACGAT ACAAACTTGC AGCCTCGTCG CGGGAAAGCT
GCAGTTCAGC ACGCAGCACA ACTTGCTCGT GACGCAGAAC AAAAAGCTTT AGAGCGTCAG
CACGCAAAAG GTAAAAGCAC TGCTCGCGAG CGTCTTGACT TGCTTTTTGA CACCGGCTCA
TTCGTGGAAA TCGGACGTTT TAACGGCGGT GACATAAATA ACGACGTTGC CGGATGCGCT
GTAATCACCG GCTTTGGCGA AGTTTATGGC AGAAAAGTTG CAGTTTACGC ACAAGACTTT
TCTGTGCGCG GTGGAACTTT AGGCAAAGCT GAGGGCGAGA AAATCTGCCA TCTTTTAGAT
ATGGCTGTTG AACTTCGCGT GCCAGTTGTT GCCGTAATTG ATTCCGGCGG CGCTCGCATT
CAAGAAGGCG TGAGCGCGCT TATGCAATAC GGGCGTATCT TCAAAAAAAC TTGCGAAGCG
AGCGGCTTGA TTCCGCAAAT CTCAATTATT CTAGGTCCTT GCGCTGGTGG TGCAGTTTAT
TGCCCTGCAT TGACAGATTT GATTATTATG ACTCGCGAGC ACTCAAATAT GTTCGTAACT
GGTCCGGATG TTGTTAAAGC TGCAACCGGC GAGGCTATTA GCATGGACGA TTTGGGCGGC
GGTCTTGTGC ATAACGCAAC TTCCGGTGTC GCTCACTATT TGGGAGAGGA TGAAGCTGAC
GCAATCGACT ACGCGCGCAC AGTTTTGGCT TATTTGCCAT CTAGCTGTGA GGTAGAGCCT
CCAACTTTTG CCTACGCTGC AACGCGCGCG GATCGTGAAA CTGCGCGCGA GTTGGTGAAT
ATTGTGCCGG ATAACGACCG TCAGCCTTAC GATGTGCTTG ACGTGATTCG CAGAATAGTT
GACTACGGTG AGTTCGTGCA AGTGCAGGAA TTGTATGCTG CTTCTGCAGT GGTTGGTTTT
GCTTGCATTG AGGGTCATCC TGTTGGAATC GTAGCAAATC AGCCGAAGGT GAACGCTGGT
ATTTTGGATG TAAATTCTTC CGAAAAAGTC GCGCGATTTG TGCGATTGTG CGACGCGTTT
AATTTGCCTG TGGTGACTCT AGTAGATACT CCTGGTTATA AGCCTGGTTC AGATCAAGAG
CACGCAGGAA TTATTCGCCG AGGTGCGAAA GTGATTTATG CGTACGCGAA CGCGCAAGTT
CCGCTGGTTA CGGTGATTTT GCGCAAAGCT TTCGGTGGAG CTTATATCGT TATGGGTTCC
AAGTCGATGG GTGCGGACGT AAATTACGCG TGGCCAACCA GCCAGATTGC GGTTTTGGGT
GCGCAAGGTG CCGTAAATAT TATTCATCGT AAAGATTTGC AAAAAGCTAA AGAGCGTGGG
CAAGACGTTG CGGCTCTTAG AAAACAGCTG GTTGACGAGT ATGAGGTGAC TACTGTTAAC
GCAAATCTTT CGTTGGAAAC TGGTCAGATT GACGCAATGA TTGACCCGGA GCAGACTCGC
GATATGATTG CTGGCTCATT GAAGCTTTTG CGAAGTAAAA AGCGAGTTTC CAGAACTGGA
AAGCATCACG GGAATCAGCC AATGTAA
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| Protein sequence | MSTLAKEKSE ISETSAKTVN NSSVNSSADD TNLQPRRGKA AVQHAAQLAR DAEQKALERQ
HAKGKSTARE RLDLLFDTGS FVEIGRFNGG DINNDVAGCA VITGFGEVYG RKVAVYAQDF
SVRGGTLGKA EGEKICHLLD MAVELRVPVV AVIDSGGARI QEGVSALMQY GRIFKKTCEA
SGLIPQISII LGPCAGGAVY CPALTDLIIM TREHSNMFVT GPDVVKAATG EAISMDDLGG
GLVHNATSGV AHYLGEDEAD AIDYARTVLA YLPSSCEVEP PTFAYAATRA DRETARELVN
IVPDNDRQPY DVLDVIRRIV DYGEFVQVQE LYAASAVVGF ACIEGHPVGI VANQPKVNAG
ILDVNSSEKV ARFVRLCDAF NLPVVTLVDT PGYKPGSDQE HAGIIRRGAK VIYAYANAQV
PLVTVILRKA FGGAYIVMGS KSMGADVNYA WPTSQIAVLG AQGAVNIIHR KDLQKAKERG
QDVAALRKQL VDEYEVTTVN ANLSLETGQI DAMIDPEQTR DMIAGSLKLL RSKKRVSRTG
KHHGNQPM
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