| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_1179 |
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| Symbol | glf |
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| ID | 8710043 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | - |
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| Start bp | 1381798 |
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| End bp | 1383039 |
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| Gene Length | 1242 bp |
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| Protein Length | 413 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 646483269 |
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| Product | UDP-galactopyranose mutase |
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| Protein accession | YP_003374376 |
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| Protein GI | 283783622 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0562] UDP-galactopyranose mutase |
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| TIGRFAM ID | [TIGR00031] UDP-galactopyranose mutase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTACGAAA AAGCAAAATC AGCAACTTAC CCAGATTTAG TAGTTGTTGG AGCAGGATTG
TTCGGCTTAA CTGTAGCTCA GCAAGCAGTG GAGCATACGG GCGCTCGCGT TGAAATTATT
GACGTTCGAA ATCACATCGG TGGAAATGCT TACTCGTATT TTGACGAGCG CACAGGAATC
GAAATTCACA AGTACGGTGC GCATCTTTTT CACACAAGCA ATAAGCGCGT GTGGGATTAT
GTGAACCGTT TTACGTCGTT TACTAACTAC GTGCATCGCG TGTATGCAAC TCATGACGGC
GAAGTTTACC CGTTGCCAAT CAACTTGGGT ACAATTAACC AGTTCTTCCA CGCGCACTAC
ACGCCAGAGG AAGCAAAGGC TTTGATTGCA AGCCAAGCGG GGGAGTTGGC TGGCAAAGAT
CCGCAAAATT TGAACGATAA GGGCATTAGC TTAATTGGTC GTCCGCTTTA TGAAGCGTTT
ATTAAAAACT ACACGGCAAA GCAGTGGCAG ACGGATCCTT CCGAGCTTCC TGCTGGAATT
ATTAAACGCT TGCCTGTGCG ATTTAACTAC AATAATCGCT ATTTTAAAGA CACTTGGGAA
GGCTTGCCAA CGGACGGCTA CACAGCTTGG ATGCAGCGCA TGATTGACGA TCCGCGTATT
CACGTTTCGC TTGGTGTAGA CTTTTTCGAC GAGTCGCAGC CGTTTAATAA GCGCGCGTTG
GCGGAGGCTG GAGTGCCGGT TGTTTATACC GGTCCGGTTG ATAGGTATTT TGACTATGCG
CTCGGCGAGT TGAAGTGGCG CACTGTGGAC TTTAAGGAAG TGCGTTACGA GGAGAGCGAC
CACTTTGGCT GCCCAGTTAT GAACTATTCG GATGCTGATG TGCCGTTTAC GCGCGCGATT
GAGTTTAAGA ACTTTAATCC AGAGCGCGAG GAAGTTGGCG GAGAGGCTAG TGGCGATGCT
GACGATTGCG CAACTTTCGT GCCGAGCAAA AGCGTGAAAG CTGGGGAAAC TGTAGTGTGG
CAGGAGTATT CTCGCGCTGC AACTCGCGAC GATGAGCCTT ACTATCCTGT GAATACTGAT
GCAGATAAAG CCTTGTACGC GCGCTATGCG GAGCTTGCTG CGGCTGAGCC TCGCACAGTT
TTCGGCGGTC GCTTGGGAAC TTACAGCTAT TACGACATGC ACAACGTAAT CGACATGGCT
TTGCGCGCTT ACGAATCTCA AGTAGCGCCG TTGCTGGCTT AG
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| Protein sequence | MYEKAKSATY PDLVVVGAGL FGLTVAQQAV EHTGARVEII DVRNHIGGNA YSYFDERTGI
EIHKYGAHLF HTSNKRVWDY VNRFTSFTNY VHRVYATHDG EVYPLPINLG TINQFFHAHY
TPEEAKALIA SQAGELAGKD PQNLNDKGIS LIGRPLYEAF IKNYTAKQWQ TDPSELPAGI
IKRLPVRFNY NNRYFKDTWE GLPTDGYTAW MQRMIDDPRI HVSLGVDFFD ESQPFNKRAL
AEAGVPVVYT GPVDRYFDYA LGELKWRTVD FKEVRYEESD HFGCPVMNYS DADVPFTRAI
EFKNFNPERE EVGGEASGDA DDCATFVPSK SVKAGETVVW QEYSRAATRD DEPYYPVNTD
ADKALYARYA ELAAAEPRTV FGGRLGTYSY YDMHNVIDMA LRAYESQVAP LLA
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