| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_1174 |
|---|
| Symbol | |
|---|
| ID | 8709946 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Gardnerella vaginalis 409-05 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013721 |
|---|
| Strand | - |
|---|
| Start bp | 1377347 |
|---|
| End bp | 1377685 |
|---|
| Gene Length | 339 bp |
|---|
| Protein Length | 112 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 646483264 |
|---|
| Product | ACT domain protein |
|---|
| Protein accession | YP_003374372 |
|---|
| Protein GI | 283783618 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3830] ACT domain-containing protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.440111 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTCGCCA ATAACGCAAC AGCAGTTGCA GAGAATAATG AATCGCAAGA AGCGTTGCAA
TCTGATGCTT TCAGGGCGAT TATTACCGTT GTCGGCTGCG ATACCGTTGG TATTATTGCA
AAAGTTACTT CACATGCTGC CGAGCATAAT GTAAATATTT TGAATATTTC TCAAACAATT
GTCGACGGAT TCTTCAACAT GATGATGATT GTTGACGTGT CTACTGTTGA TTGCGAATTT
GGCAATTTTG CTGCAGGATT AGAAACGCTA GGAGACGAAA TTGGCGTGCG TATTCGCTGC
CAGCGTAGCA ATATTTTCAC TGCAATGCAC AGAATCTAA
|
|---|
| Protein sequence | MVANNATAVA ENNESQEALQ SDAFRAIITV VGCDTVGIIA KVTSHAAEHN VNILNISQTI
VDGFFNMMMI VDVSTVDCEF GNFAAGLETL GDEIGVRIRC QRSNIFTAMH RI
|
|---|
| |