| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_1138 |
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| Symbol | |
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| ID | 8709035 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | - |
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| Start bp | 1314130 |
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| End bp | 1315365 |
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| Gene Length | 1236 bp |
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| Protein Length | 411 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 646483229 |
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| Product | glycosyltransferase, group 2 family protein |
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| Protein accession | YP_003374337 |
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| Protein GI | 283783583 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1215] Glycosyltransferases, probably involved in cell wall biogenesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAGCGA TGATTCTTCT ATCAATATTT GATGTACTAG TAATACTTAT TGGCATAAGC
GGTGTTGTGT ATCAAGGTGT TTGTGCTGTT GCATCTTTAT TCGCTAAGCC TATTGTTTTT
CCTGAAGCAC CAATGGATAA GCATTATGCT GTGCTTATTT CTGCGCGCAA TGAGGAAGCT
GTTATAGGTA ATCTTATTCA TTGCATTCAA ACTCAAACAT ATAGACAAGA TTTTATTGAT
ATTTGGCTTG TTGCAGATAA TTGCACTGAT TCTACTGCGC AGGTTGGCCG CAATTGCGGA
TGCAACGTAA TTGAACGTTT TGATAAAGAG CATATTGGTA AAGGTTATGC GCTCAGCTAT
CTTCTCGATC ATATTATGAA AATTGGTGCG GATAAAGTTT ATGACGCATA CTTTGTTTTC
GATGCAGACA ATAAACTTGA TCCGCATTAT TTTGAGGAAA TGAATAAAGG TTTCCACGCA
GGATATCAAA TTTTAACCAG CTATCGTAAT TCCGTGAATC TTTCAGATAA TTGGGTTTCG
TCTGGCTCTG CACTTTGGTT TATTCGAGAA TCGCGATTTA CTAACAACTC TCGAATGCTA
TTCGGTTCGA GTTGCCATGC TGGTGGAACT GGATTCATGT TCTCGCGTGA GATTATGCAC
AGAAATAGCG GATGGAAATT CCATCTTCTT ACTGAGGATC TTGAATTTAC TATGGATGCT
ATTCTTCACG GAGACAAAGT TGGATATTGC GGTTCTGCAG TATTGTATGA TGAACAACCT
GTGTCGTTTA GGCAGAGCTG GAGGCAGCGT CTTCGTTGGA GCAAGGGATT CTTGCAGGTA
TTTCGTTACT ATGGAGCAGC TCTTATTCGA CATGGTATTC GCGAAAGAGA TTTTTCGTCG
GTTGATTTTA CGCTTATGCT TTTCCCATTT ATGGTTTTGG CTGTTGCAAG AATAATACTT
GGGTTTATTT TTGCTGCATT TGGATTTGTA ACATGGATGA GTCAAATCTA TTCAATGATT
AACTTCATTA CAACTACTGT TACAAGTGTT TTAGGCATGA TGATATTTGT GTCGCTCACT
ATTTTAGTTG AACACGATAA GCTTGGTGCA ACGAATAAGG AACTATTTGC GTACGCTCTT
AGCTTCCCGA TTTTTATGCT TTCGTACGTG CCTATTGCGT TCCAAGCTAT TTTCTCAAAG
AGCGAGTGGA AGCCGATTCA GCACACTGGT CGCTGA
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| Protein sequence | MEAMILLSIF DVLVILIGIS GVVYQGVCAV ASLFAKPIVF PEAPMDKHYA VLISARNEEA
VIGNLIHCIQ TQTYRQDFID IWLVADNCTD STAQVGRNCG CNVIERFDKE HIGKGYALSY
LLDHIMKIGA DKVYDAYFVF DADNKLDPHY FEEMNKGFHA GYQILTSYRN SVNLSDNWVS
SGSALWFIRE SRFTNNSRML FGSSCHAGGT GFMFSREIMH RNSGWKFHLL TEDLEFTMDA
ILHGDKVGYC GSAVLYDEQP VSFRQSWRQR LRWSKGFLQV FRYYGAALIR HGIRERDFSS
VDFTLMLFPF MVLAVARIIL GFIFAAFGFV TWMSQIYSMI NFITTTVTSV LGMMIFVSLT
ILVEHDKLGA TNKELFAYAL SFPIFMLSYV PIAFQAIFSK SEWKPIQHTG R
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