| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_1137 |
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| Symbol | |
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| ID | 8709084 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | - |
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| Start bp | 1312534 |
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| End bp | 1313439 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 646483228 |
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| Product | ABC transporter, ATP-binding protein |
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| Protein accession | YP_003374336 |
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| Protein GI | 283783582 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTAGATT CTATTCCGTC TGAATATCCG TCCGAGTATC CGTCCGGAAA TACTTTTGCT
AGCAGCGTTC CAGTTTTTGG CGCAAACACT TACGACGCTA CTAACGAAGA TGTTCCAGCG
GTTTCTATTA GCGGATTTGT TAAGACTTTT GGCAAGAAAG TTGCTGTAGA TAATCTTTCG
TTGAGCATTC CAGCAGGCTC TTTCTATGGA TTAGTCGGCC CGAATGGTGC TGGCAAAACT
ACTACGATTA AAATGCTTAC GGGCTTGCTT ATGCCAGATG CTGGCTCGGC TTCGATTTTT
GGCAACGATG TTTGGAGTGA CGTAAATCGC GCTAAGCGCG CAATCGGTTT AATGCCTCAG
GCCGACGAGA TTTTTAAGAC GATTACTGGC CTTCAGCTTT TAACTTACGC TGGCATGCTT
CGCGAGATGA GCCGCGCTGA GGCTGTTCGT CGCGCGAACG ATTTGCTTTG TGCATTCGAC
TTAACAGAAG CTGCAAACAC TATGGTTTCG GACTATTCAA CTGGTATGAC TAAGAAGATT
TGCCTTGCAA CAGCTATGAT TCACAGCCCT CGCGTACTTG TGTTGGACGA GCCTTTTGAG
GCAGTGGATC CTGTTTCTAG CGCAAATTTG AAGGATATTC TTGCCGAGTA TGTTTCTACT
GGCGGAACGG TGATTATTTC TTCGCACGTT ATGGAATTGG TTGAAAAAAT GTGCTCGCAC
GTGGCGATTA TTAACGAAGG TCATGTTGCG GCTGCTGGCA CTCTTGAAGA GGTGGCTCAG
GGCAAAGATC TTGAAGATCG CTTTATGGAG CTTGTTGGCG GACGTCACGC AGCTGCGCGC
ATCGACTGGC TTAACGGCGG CAAATCTGAT AACGCTCCTG CATCTTCCAC CAATCTCAAC
GCTTAA
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| Protein sequence | MVDSIPSEYP SEYPSGNTFA SSVPVFGANT YDATNEDVPA VSISGFVKTF GKKVAVDNLS
LSIPAGSFYG LVGPNGAGKT TTIKMLTGLL MPDAGSASIF GNDVWSDVNR AKRAIGLMPQ
ADEIFKTITG LQLLTYAGML REMSRAEAVR RANDLLCAFD LTEAANTMVS DYSTGMTKKI
CLATAMIHSP RVLVLDEPFE AVDPVSSANL KDILAEYVST GGTVIISSHV MELVEKMCSH
VAIINEGHVA AAGTLEEVAQ GKDLEDRFME LVGGRHAAAR IDWLNGGKSD NAPASSTNLN
A
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