| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_1117 |
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| Symbol | |
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| ID | 8709057 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | - |
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| Start bp | 1286532 |
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| End bp | 1287860 |
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| Gene Length | 1329 bp |
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| Protein Length | 442 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 646483208 |
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| Product | DivIVA domain protein |
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| Protein accession | YP_003374318 |
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| Protein GI | 283783564 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR03544] DivIVA domain |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.378079 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTCTGT TGACGCCTAA GGACATTCGA GAGCATACCT TCCAAATTGT ACGTTTTAAG
GGAGGTTATG ACGTTGACGA GGTCGACGAG TTTCTCGATC AGGTTACAGA AACAATAGAA
GCACTCGGTC AGCAGGCAGT GCAGGGCCTA GGGGCTTCCA CGCAATCTCT TGGCCGTGAT
GTTGCGGGTT TGAATACGAA GATTGCTGAG TTAACTTCTA AGGTAGAATC CTTAACTAAA
GAAAATGAGG CATTGCGTGA TGCTTCTAAG AAGCAGGGTG AATCAAATGA AGCTGCTTCT
CAACTTGAAG CTACTGCAAC TAAGTTGCGT GAAGCTGAAG AAAGTAATCG TGCTTTGACT
GCTCAAAACC AGCAGTTGAA GGAACAGTTA GATGGTTTGG GTGCGCAGGT AGATCAGTTA
ACTGCTCAAA CTGCTCAAGC AGACAATGCT AAGCAGGTTC AAAAAGAGCT TGAAACTGTT
ACTCGCGAGC GTGACGACTT CCGTGCAAGC AGCGAAAACT TGGGTCGCGA GCTTGAAACT
GTTCGCCAGC AGCTTGTTGT CACTCAGCAA GAAAACACTA AGATTGAGGA ACTTTCCAAG
CAGTTGGAAG AGTCTCGTCA GCGTGAAGAG CAGCTTCGAA AGCAGGTTGC TAAGATGGAA
CCAAATACTG AAACTGGTAG CTTGCAAAAG ATTGCTGGTG CTGGTGCAGA AGCACAAGGT
TCTGAGCCAG AGCGTGCAAC TGCAATGTTG ACTCTTGCTA TGCAATTGCA TGATCAATAT
GTAGATAAAG GCAAGGCTAA GGCTCAACAA ATTGTTGAAG AAAGCCAAGC TCGTTATAAC
GAAACTGTTG CTAAGGCAGA TGAATATTCT GCACGCACTC GTTCTGAAGC TGAAGAATAC
AGCAAGCAGA CTCATGCTGA TGCTGACGAT TACTCTACTC GTACTCGCGG CGATGCTGAT
TCTTATGCTG CTCGTGCTCA CAATGAGGCT GATGCTTACT CTGGTAAGGT TCGTCAAGCT
GCTGATGATT ACTCTAAGCA GACGCATGAT CAAGCTGACC AGTATGAAGC TGAAGTACAG
CATCGTGCTG CAGACTATGA TTCTACAACT CGTACAGCTG CTGATGCATA TGCTCGTCAG
GTACGTGAGA ATCTTGAGAA GCAAACTCAA GTTATTGAAG GAAATATTCA GAGCCTCAAG
CAATTTGAGA CTGAATATCG TACTCGCTTG ACTGATTTCC TTGGTCAGTT GGTTGCTCAA
GTTTCTGATG AAAATACCTA TGCTGCATTA GGCAACAAGC AGGGTGAAGA ATCTGGTAAG
CAAGAGTAG
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| Protein sequence | MTLLTPKDIR EHTFQIVRFK GGYDVDEVDE FLDQVTETIE ALGQQAVQGL GASTQSLGRD
VAGLNTKIAE LTSKVESLTK ENEALRDASK KQGESNEAAS QLEATATKLR EAEESNRALT
AQNQQLKEQL DGLGAQVDQL TAQTAQADNA KQVQKELETV TRERDDFRAS SENLGRELET
VRQQLVVTQQ ENTKIEELSK QLEESRQREE QLRKQVAKME PNTETGSLQK IAGAGAEAQG
SEPERATAML TLAMQLHDQY VDKGKAKAQQ IVEESQARYN ETVAKADEYS ARTRSEAEEY
SKQTHADADD YSTRTRGDAD SYAARAHNEA DAYSGKVRQA ADDYSKQTHD QADQYEAEVQ
HRAADYDSTT RTAADAYARQ VRENLEKQTQ VIEGNIQSLK QFETEYRTRL TDFLGQLVAQ
VSDENTYAAL GNKQGEESGK QE
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