| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_1102 |
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| Symbol | |
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| ID | 8709830 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | - |
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| Start bp | 1266784 |
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| End bp | 1268445 |
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| Gene Length | 1662 bp |
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| Protein Length | 553 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 646483193 |
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| Product | putative cell division protein FtsW |
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| Protein accession | YP_003374303 |
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| Protein GI | 283783549 |
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| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
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| COG ID | [COG0772] Bacterial cell division membrane protein |
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| TIGRFAM ID | [TIGR02614] cell division protein FtsW |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTATTCA ACAGTAATAA GCCTAAAAAG TTTTTGCGTT CATTAGCGTG CAAAGTCTCA
GAAGTTATTA TGGAAGATCA TATTGAAACA GATTCAGATT CTTCTCATTC TTCCCAAAAG
CAAAAATTTG AATCTTTTAA AAAATCTATT AGAACTTCAG CAAGTAAAGT AGGCGAGTCC
GTAAGCAAAG CAGGAGCGTA TGCAAGCAAA GCGGGTAAGG AATTAGGCAA ATCTGTAGGA
AAGTCTGTAA GTAAGTCCGT AAGTAGTTCT GTTACTAAAG TTGGCAAATC TGTAGGTTCT
TCTTTAAATG AATCTGTAAA ATTTGTAAAA GATGTAAAGA AGTCGAAAGC TGCGAAACCA
GCGAAACCAG CAAAGCTAGC GAAACCAGCA AATACAGCAA AGCCGGCAAA GTCAATCAAA
TACGCAAAAT TAGCGCATAC TGTATCTGGA ATATTTTCCT CGAAAAAAGA CTACTCAAAA
AACTCGTTAG AGCGCAAAAC TCAAGATTCA GAATTAAAGA AATACGTTGG CTTGCGCAGT
TTAACTAACC CACTGTGGTG CTTATACGGC ATGAGAGTAT CAGTGGTTAT ACTGTCGATT
TTCGGCTTAT TTATGGTGTT TTCTAGTTCT TCAGTAACTA TGATCACCTA CGGAATTGCA
CCTTGGGGTC AAGGCGTAAA CCAAACAATG TATTGCGTTT TAGGCTTAAT TGGCTATATT
TTCGCTTCTC GACTTCCAGT TACAGTTTAT AGACGATACG TTGCTGTTAT TTACATTATT
TCTGTTATTG CACAGTTCTT AACATTTGTT CCAGGTTTAC GACGTGAAGT TAATGGTAAT
GCTGGTTGGA TTGCTTTCGG CCCTATGACT TTGCAGCCTG CAGAAATTAC AAAACTTGCA
TTATGTATTT GGCTTCCAGT AGCTTTGATT GCTGCAAAAC AAGCATATGA GCGTGTGCAA
ATGCGCGCGT ATATTCCTGT AGCAGCAGGA CTTGGCGTAT CGTTGTTGCT TGTTATTGCA
GGTAAGGATC TTGGTACTGC TTTAATTATT ATTCTTATTG CACTTATAGC TTTCTACTTA
GGTGGATTCC CAACAAAATG GCTTGTTGGA AGCATATTTA TTGCTTGCAT AATGGTTGCT
CTTTTGGTTT TAACAAGCCA AAATCGTATG CGACGTATTC TTGCTACTTT GCACGGATGT
GATGCAAAAT CAGCTAAAGG CGTTTGTTTC CAAGCAATTC ACGCTCAATA TGCAATGGCT
TCTGGTGGAC TATTAGGCGT TGGCATCGGA AACTCTCGTG AAAAATGGAA TTATTTGCCT
TACGCTCACA ATGACTTTAT TTTCGCTATT ATTGGCGAAG AGATGGGCTT TTTGGTTGCA
GCAGCAGTGA TTTTGCTATA CGTAATTATT GGTTGGTGCA TACTATCTTC AGCATTAAAA
GCGAAATCGC AATTTATTTC AATCACATTA ATGTGTATTG CAACGTGGAT TGTAGGCCAA
GGATTAGTTA ATATTCTTGT TGTTGTGCAA ATACTTCCGG TTATGGGAGT GCCTATGCCG
TTTGTGTCCG CAGGTGGTTC TTCGCTTGTT ATGTGTTTGG TCGCAATTGG CGTAGCTGAT
GGTCTTATGC GTTCCAATCC GCAACTTACT ATATCGAAGT AG
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| Protein sequence | MVFNSNKPKK FLRSLACKVS EVIMEDHIET DSDSSHSSQK QKFESFKKSI RTSASKVGES
VSKAGAYASK AGKELGKSVG KSVSKSVSSS VTKVGKSVGS SLNESVKFVK DVKKSKAAKP
AKPAKLAKPA NTAKPAKSIK YAKLAHTVSG IFSSKKDYSK NSLERKTQDS ELKKYVGLRS
LTNPLWCLYG MRVSVVILSI FGLFMVFSSS SVTMITYGIA PWGQGVNQTM YCVLGLIGYI
FASRLPVTVY RRYVAVIYII SVIAQFLTFV PGLRREVNGN AGWIAFGPMT LQPAEITKLA
LCIWLPVALI AAKQAYERVQ MRAYIPVAAG LGVSLLLVIA GKDLGTALII ILIALIAFYL
GGFPTKWLVG SIFIACIMVA LLVLTSQNRM RRILATLHGC DAKSAKGVCF QAIHAQYAMA
SGGLLGVGIG NSREKWNYLP YAHNDFIFAI IGEEMGFLVA AAVILLYVII GWCILSSALK
AKSQFISITL MCIATWIVGQ GLVNILVVVQ ILPVMGVPMP FVSAGGSSLV MCLVAIGVAD
GLMRSNPQLT ISK
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