| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_1087 |
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| Symbol | rpmE |
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| ID | 8709110 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | - |
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| Start bp | 1244499 |
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| End bp | 1244711 |
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| Gene Length | 213 bp |
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| Protein Length | 70 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 646483179 |
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| Product | ribosomal protein L31 |
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| Protein accession | YP_003374290 |
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| Protein GI | 283783536 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0254] Ribosomal protein L31 |
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| TIGRFAM ID | [TIGR00105] ribosomal protein L31 |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGCAGG GTATTCATCC CGACTATCAC GCAGTGCAGG TTACCTGCTC TTGCGGAAGC
ACTTTCGTAA CTCGTTCTAC CGCTGATGGC GATCACATGA CGGTTGACGT GTGCTCAAAG
TGCCACCCAT TCTATACCGG CAAGCAGAAG ATTCTCGACA CCGGCGGTCG CGTGGCTCGC
TTCGAGAAGC GCTACGGTAA GAAGACTAAG TAG
|
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| Protein sequence | MKQGIHPDYH AVQVTCSCGS TFVTRSTADG DHMTVDVCSK CHPFYTGKQK ILDTGGRVAR
FEKRYGKKTK
|
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