| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_1074 |
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| Symbol | map |
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| ID | 8708811 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | - |
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| Start bp | 1226730 |
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| End bp | 1227503 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 646483166 |
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| Product | methionine aminopeptidase, type I |
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| Protein accession | YP_003374277 |
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| Protein GI | 283783523 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0024] Methionine aminopeptidase |
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| TIGRFAM ID | [TIGR00500] methionine aminopeptidase, type I |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATTGAAC TTAAAACTCC ATCTGAAATT GAAGCGATGA AGCCTGCAGG TCGCTTCGTC
GGTAGTATTC TTAAAGACTT GAAAGCAATG ACCAAAGTTG GCACGAATCT TCTTGAGATT
GATGATTTCG TTCGCCAGCG TATTATGAGC CGCAAAGGTG CGTCTTCTTG CTATGTTGAT
TACGCTCCTG ATTTTGGTAC AGGTCCTTTT GCGCACTATA TTTGCACGTC TGTAAACGAT
GCTGTTCTTC ACGGAGTTCC TTTTGATTAT AACCTTAAAG ACGGCGATTT GTTGACTCTT
GATTTGGCAA TTAACGTAGA CGGCTGGGTT GGAGATTCCG CTATTAGTTT CGTTGTTGGA
AAGCATGCAG ATCCTGAGGA TTTGCGCTTG ATTAAGTGCA CTGAGGAAGC TTTGGAGGCT
GGCATTAACA TGGCTCAGCC TGGCAACCGT CTTGGCGATA TTTCTGCAGC TGTTGGTTGC
GTTGCTCACG AGTACGGCTA CAGCGTAAAT CTTGAGTTTG GCGGTCACGG AGTCGGTCAT
ATTATGCATG GCGATCCGCA CGTTCCTAAC GATGGCACTG CTCACCACGG CTACAAGCTT
CGCCCAGGTT TAGTTATTGC AATTGAGCCA TGGTTCTTAA AGACTACTGA CGAAATTTAC
CAGGATCCTA AGGATGGTTG GACTCTTCGC TCTGCTGATG GTTCTCGCGG TGCTCACAGC
GAGCACACGA TTGCAATTAC GGAAAACGGT CCTGAGATTT TGACCGTGCG CTAA
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| Protein sequence | MIELKTPSEI EAMKPAGRFV GSILKDLKAM TKVGTNLLEI DDFVRQRIMS RKGASSCYVD
YAPDFGTGPF AHYICTSVND AVLHGVPFDY NLKDGDLLTL DLAINVDGWV GDSAISFVVG
KHADPEDLRL IKCTEEALEA GINMAQPGNR LGDISAAVGC VAHEYGYSVN LEFGGHGVGH
IMHGDPHVPN DGTAHHGYKL RPGLVIAIEP WFLKTTDEIY QDPKDGWTLR SADGSRGAHS
EHTIAITENG PEILTVR
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