| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_1046 |
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| Symbol | |
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| ID | 8708973 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | + |
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| Start bp | 1188864 |
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| End bp | 1189670 |
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| Gene Length | 807 bp |
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| Protein Length | 268 aa |
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| Translation table | 11 |
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| GC content | 27% |
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| IMG OID | 646483139 |
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| Product | cobalt transport protein |
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| Protein accession | YP_003374250 |
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| Protein GI | 283783496 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0619] ABC-type cobalt transport system, permease component CbiQ and related transporters |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATTATA TAGATACTAT TAATCAAGTA AAAAATACAA ATACGTTTGT AACGCTGTAT
CCTACAACAA AATTTATATT GACCATATAT TTGATAATAG TAGACATTAT ATTAAATACT
TTTTCATTCA CATTATACTA TTTACGACTT TTATTGTTCC CCTATTTTCT TGCTCTACTT
ATTCTGATGA TTCTATGCGG AATAAAAAAG AATGGATATA AACTTGTAGC AAGTATAGCC
ATGTTCTCAT TATTTGTTGC AATATTTCAA GTTGCTTTCT ATAGACAAGG AAATGCAATA
TTAAATCTTA ATTTTTTGCA AATTACAGAT ACAGCATTGT CTAATTCTAT AACGCTTGGA
ATGAATACCT TAAACATATC AACTATAGTC ATATGGTTTT TCCAAATAAC TGATATAGAA
GATATTACAA TATCTTTAAG CAAACTTGGG ATGAGCAATA AAATATGTTT CATAATACTT
TCTACTTTCC AAACTATTGA TTATTTACAA ATGCAAATTA AAGCAATCAT AATCTCGCAA
AAAAGTCGTG GAATAAACTT TAATGGAAAT TTAATACGTA GAATTGGCAC ATTTACTTCG
ATTTTGCTTC CAGCATTTAT TACTTCACTA ATAAACATAG AGCAGCGCAT AATGATGCTT
GATTCAAGAA ATTTTTTTAG TTCAGAAAAA AAGACATATA TTAAACAGGT TAATCATAAT
GGTCACGAAA AATTAGTACT AGCAATAGGA ACAATTACAC TAGTTTTTCT TATTCTAGGA
AGAGTAATTT ATGGTTATCT CATATAA
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| Protein sequence | MHYIDTINQV KNTNTFVTLY PTTKFILTIY LIIVDIILNT FSFTLYYLRL LLFPYFLALL
ILMILCGIKK NGYKLVASIA MFSLFVAIFQ VAFYRQGNAI LNLNFLQITD TALSNSITLG
MNTLNISTIV IWFFQITDIE DITISLSKLG MSNKICFIIL STFQTIDYLQ MQIKAIIISQ
KSRGINFNGN LIRRIGTFTS ILLPAFITSL INIEQRIMML DSRNFFSSEK KTYIKQVNHN
GHEKLVLAIG TITLVFLILG RVIYGYLI
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