| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_1035 |
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| Symbol | |
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| ID | 8709339 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | - |
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| Start bp | 1174779 |
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| End bp | 1176848 |
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| Gene Length | 2070 bp |
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| Protein Length | 689 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 646483128 |
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| Product | arylsulfatase |
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| Protein accession | YP_003374240 |
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| Protein GI | 283783486 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1368] Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTCAT TTTTGCGCTT GAAAGTTCCG TATTGGCTGT ATGCATTTCT TTTCTTTGTT
ATTGACGGCA TGTCGGTAAT TATTGTGCAA ATGGGTGTGC AGCGCGCTGG AAGAGTTGAG
ATGACTTCTG CAATGTCTGG TGGACGTTGG GGATTAATAA CTAAAACCTG GAAAGAACTT
AATTTCGTTA TTGTTCTTAG TGCGCTCGTT GTTGCGATGA TATACGGTTT AATTCTTTTG
ATTAGTAACC GATTTTGGAT ATCAAGTGCA ATAATTCTAA GTGTTTCATT GCTTATTGCT
GTTATTGAAT ATATGAAAGT AAATGTTCGT TATGAAACTA TTCTTCCTGC GGACTTAAAC
TTTTTAAAAA GTAACACTGG TAATGTCGCT TCATTTTTGC CAGATAATGC TCCTATGGTC
ATTGGTGTTG CTTTAGGCGT TTTTATTTTG CTTTTAGTTA CAACTGTTTG CTTACACATA
TTTGATACAA ATCATGGAAA GATTGTGCGA TTTAAAGATT GGCGTTATTC TGCTGGTATT
CGTGTTGCAA TTGCGTTGAT TTTAATAGGG AATTTAAGCT GGTATATTGG CGGCGTTGGC
ACAGTTGACT CTTCGGCTAA TGTTTTTTCT AAAATGCTTG GTGACAGTCC TGCTATGTGG
GATTCTGTTT ATGACGCTCA ACGCAATGGT GCTATTGTGG CATTTTTGCG TAATGTAAAT
CCTAAAATTA TGGATAAACC GGCTGATTAC AGTGAAGAAA CTATGAAGGC TGTATACAAG
CGTTATAACG ATGAAGCTAA ACGTATAAAT CGTTCTCGTA CAACAAATAT GAACGATAAT
ACTTTTATTC TTATCTTGTC TGAATCGTTC TCTGATCCTA CTCGTGTTCC TGGTTTGAAG
TTGAACAAGA ATCCAATACC ATTTATTAGC AATTTAAAGA AGCATACGGA TAGTGGTTTG
ATGCTTTCTT CTGGTTATGG TGGCGGTACT GCAAATCTAG AGTACATGTC TTTAACTGGT
TTGAGCATGG CTAATTTTGA TCCTTCAATG ACTAGCCCGT ATCAGCAGTT GGTTCCTAAT
GCTCAATGGT CTCCAACTAT TAATCAATAT TGGGATGATT CTCGTAATTC TATTAAATCT
ATAGCTTTCC ACCCGTATGA GCCGAGCATG TATTTGCGCG CTACTAATTA CAAAAAGTTT
GGATTTAGTA AGTTCTACGC ATTGCAAGGA CCTGATGTTA TTGCTCACCG TGATGTTATA
GATAAATCAC CGTATGTTTC TGACGCATCA GCATATAAGA GTGCGTTAGA AAAGATTAAA
GAGCATAAGC AACCTAGGTT CGTACAAATT GTTACTATGC AAAACCATAT GCCTTATAGG
GATTGGTATG CGAATAATGA ATTCGAAGCG TCTTCTAAAG ATGGTGCCGC TGATCTTGGT
GATGATGAAA AAACTTCTAT TGAAACGTAT GCTAAGGGTG TGCAGCACAC TGATGAGACA
ACACAAGCGT TTTTGAAGAG TTTAGATAAA CTAAATAAGC CTATTACTGT TATGTTTTAT
GGTGACCATT TGCCAGGAAT TTACGGCACT GCAAGTTCAG ATGAAAAGAA TTCATTGTCT
TTGCATTTGA CTGATTATTT TATTTGGTCA AATAAAGTTG CTTTGGAGCG TAAAGAGCGT
AGTGAGAAAA AATCTTCAAA CAAAAATGTA GAGCATTCTA ATACAAGTAA AGATGTAGAT
CGTACTAATA AGTATTCTTC GCCTAACTTC TTTATTTCTC AGGCTGCTTT ACATATGAAC
GCTAAAGTTT CCCCGTATCT TGCTTTCTTA ACTCGTTTAC ATGAGCATGT GAGTGCTATG
GAGCCTCCTG TTGTAAATAC TATTCAAGGC TGGGATAGAA TTCCTGAAGG ACAATCAATT
TATTTGGATA ACGATGGTAA TCCGATGATT TTGTCTAAGA TGGATAAGAA GTCACGTCAA
CTTCTTCACG ACTATCGCTT AATACAATAC GATATTACTG CTGGAAAGCA TTATTTGCGT
AATACTGATT TTATGAAATT ACCGCGCTAA
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| Protein sequence | MKSFLRLKVP YWLYAFLFFV IDGMSVIIVQ MGVQRAGRVE MTSAMSGGRW GLITKTWKEL
NFVIVLSALV VAMIYGLILL ISNRFWISSA IILSVSLLIA VIEYMKVNVR YETILPADLN
FLKSNTGNVA SFLPDNAPMV IGVALGVFIL LLVTTVCLHI FDTNHGKIVR FKDWRYSAGI
RVAIALILIG NLSWYIGGVG TVDSSANVFS KMLGDSPAMW DSVYDAQRNG AIVAFLRNVN
PKIMDKPADY SEETMKAVYK RYNDEAKRIN RSRTTNMNDN TFILILSESF SDPTRVPGLK
LNKNPIPFIS NLKKHTDSGL MLSSGYGGGT ANLEYMSLTG LSMANFDPSM TSPYQQLVPN
AQWSPTINQY WDDSRNSIKS IAFHPYEPSM YLRATNYKKF GFSKFYALQG PDVIAHRDVI
DKSPYVSDAS AYKSALEKIK EHKQPRFVQI VTMQNHMPYR DWYANNEFEA SSKDGAADLG
DDEKTSIETY AKGVQHTDET TQAFLKSLDK LNKPITVMFY GDHLPGIYGT ASSDEKNSLS
LHLTDYFIWS NKVALERKER SEKKSSNKNV EHSNTSKDVD RTNKYSSPNF FISQAALHMN
AKVSPYLAFL TRLHEHVSAM EPPVVNTIQG WDRIPEGQSI YLDNDGNPMI LSKMDKKSRQ
LLHDYRLIQY DITAGKHYLR NTDFMKLPR
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