| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_1022 |
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| Symbol | |
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| ID | 8709851 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | - |
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| Start bp | 1152588 |
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| End bp | 1153319 |
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| Gene Length | 732 bp |
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| Protein Length | 243 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 646483115 |
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| Product | competence/damage-inducible protein CinA C-terminal domain protein |
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| Protein accession | YP_003374228 |
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| Protein GI | 283783474 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1546] Uncharacterized protein (competence- and mitomycin-induced) |
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| TIGRFAM ID | [TIGR00199] competence/damage-inducible protein CinA C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTTGGA AAATCGTAAG CTACAATCAT ATCGAGCGTA TTATGAATAA TTCTTCAGGT
TTTAATACAG TTTCTTTAGC TGCGAATCTA TTGGAAAAAA GTTTTATTAA AGGAATGCAT
ATTGCTTCAG CAGAGTCATT AACTGGCGGG CTTTTGGCTG ATGCTTTTGT TTCTGTTCCT
GGTGCGTCAC GAGTTTTTTG TGGATCTGCT GTCACTTATG ATATTCATGC TAAATCCAAA
ATTCTTGGCG TAAATTCTAA TCTTTTACAA TCTGAAGGCG CGGTTTACCA GGATGTTGCT
TTTCAAATGG CGATTGGAGC TGCTCAAATA TATCGTGGCA GTGGATGGGC GTATGAGGAA
GATTGTGAGT GTTGTGCAAA TTTTCCTATT ATTGGCTTGT CTACAACTGG TGTTGCAGGT
CCTGGTCCTG ATGGTAGTAA ACCAGCAGGT TTAGTTTATG TTGGAATATT TTTGCCTCAA
GTTAGTGATG TTATGGATTC TGTTAAAGAT GTAGCTCGTA AAGAACTTGA AAATGGCTGT
GTGAGTAACG TCTATGATTA TGATTTTGCT CAAATCGAAA GTCAAAGCGT AACTAAAATT
GCGCCATCAA GTGCTGCTTT TGTTTTTGAA TTGAGATTAT CTGGCAGTCG TCAAGAAGTT
CGCGAATCTA CTGTATTTCA GTTGTTGAGA ATAGCTAATG ACTTGATTGC TTATGTCGAA
GATTGTAAGT AG
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| Protein sequence | MFWKIVSYNH IERIMNNSSG FNTVSLAANL LEKSFIKGMH IASAESLTGG LLADAFVSVP
GASRVFCGSA VTYDIHAKSK ILGVNSNLLQ SEGAVYQDVA FQMAIGAAQI YRGSGWAYEE
DCECCANFPI IGLSTTGVAG PGPDGSKPAG LVYVGIFLPQ VSDVMDSVKD VARKELENGC
VSNVYDYDFA QIESQSVTKI APSSAAFVFE LRLSGSRQEV RESTVFQLLR IANDLIAYVE
DCK
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