| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0941 |
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| Symbol | |
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| ID | 8709934 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | - |
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| Start bp | 1080891 |
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| End bp | 1081937 |
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| Gene Length | 1047 bp |
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| Protein Length | 348 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 646483038 |
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| Product | putative DNA polymerase III, delta subunit |
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| Protein accession | YP_003374154 |
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| Protein GI | 283783400 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1466] DNA polymerase III, delta subunit |
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| TIGRFAM ID | [TIGR01128] DNA polymerase III, delta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGCAA ATAATAAGCG CGCGCAACGC GTTATGCCAG TTACGCTGGT AGTTGGAGGT
GACGCTTACT TAAACGAGCT TAATGCTCGA ACTGTGCGTG AAAAAGTTCA AGAAAGTGCT
CCGGATGCTG AAATTATTGA ACTCGATGCG TCAACTGCGG ATCAGTACGC ATTTGACGAA
GCTGTAGGTC CTTCGCTTTT CGGTGACGGA ACGATTGTAA TAATAAATAA TTTGCAACAA
GCAGACGAGT CTTTAGTAGA CGCAATCGAA AATTTCTGCA AACAAGCGCA AAATAGTGAA
AATAATGCGC AAAATAGTGA AAATAATGCG CAAAATAGTG AAAATAGCGA AAATTTTGTA
GACTCTTCTG CAACTTGGGT TATTGCACGT CACGAAGGTG GGCTTAAAGG AAAGTCTATT
ATTACGCGCC TTACGAAAGC TGGCGCAAAC ACAATTACAG TGCCGGATCT TAAAAAAGAC
GATGCAAAAC TCAACTTTGT TATGAGCATA TTTGAGCGTC ACAATCGAAG CGTTGAGCCT
CAAGCAGCAC AACGTCTTGT GTCAGTTTTG GGAAGTAAAA CAGGAGAGCT TGCAGCATTA
TGCTCGCAAT TATGCTTCGA TTATGACGAT AATCCAATAA CGCTTGATAT TGTCGATCGA
TACTTGGTTG CAGATCCGCA AGTTACCGGC TTTTTTGTTG CAGATAAAGC TGTTGCAGGT
CATGCAGGTT CTGCTGTGCT TGCAGCAAGA ACTGCAATTG CTCAAGGAGT TGACGCCATA
GCATTAATAG GTGCTTTGGC TGCAAAAGTA CGCGTAATTG CGCTCGCAAT GGCAATTCGC
AACGGCACGA TTTCTAGTGC TGAAGCGAAA GTAAACCCGT GGGCTCTGAA AATGGCAATG
CGTCAGCTTG CTGGATGGAA TAGTGCAGGT GTTTCTCAAT GTTTGCAATC TTTAGCTTGG
GCGGATGAGC AGTGCAAAGG CGGATCTAGT GACGCGAATT ATGCGCTTGA AAAATGTATT
ATGCTCATTG CGTCTCGAGG AAATTAG
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| Protein sequence | MAANNKRAQR VMPVTLVVGG DAYLNELNAR TVREKVQESA PDAEIIELDA STADQYAFDE
AVGPSLFGDG TIVIINNLQQ ADESLVDAIE NFCKQAQNSE NNAQNSENNA QNSENSENFV
DSSATWVIAR HEGGLKGKSI ITRLTKAGAN TITVPDLKKD DAKLNFVMSI FERHNRSVEP
QAAQRLVSVL GSKTGELAAL CSQLCFDYDD NPITLDIVDR YLVADPQVTG FFVADKAVAG
HAGSAVLAAR TAIAQGVDAI ALIGALAAKV RVIALAMAIR NGTISSAEAK VNPWALKMAM
RQLAGWNSAG VSQCLQSLAW ADEQCKGGSS DANYALEKCI MLIASRGN
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