| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0882 |
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| Symbol | tig |
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| ID | 8708926 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | - |
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| Start bp | 1000933 |
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| End bp | 1002282 |
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| Gene Length | 1350 bp |
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| Protein Length | 449 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 646482982 |
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| Product | trigger factor |
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| Protein accession | YP_003374098 |
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| Protein GI | 283783344 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0544] FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) |
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| TIGRFAM ID | [TIGR00115] trigger factor |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAAATCA GCGTCAGGAA TCTTGAGCCA ACTAAAGTTA AGCTCACCAT TACCGCAGAT
CTCGAAGACT TCAAGCCATT CTTGGAAGAA GCTCGTAAGG AGATTGCTAA GCAAATTAAC
GTGCCAGGTT TCCGTAAGGG ACATGTGCCA GGCAAGATTG TAGATCAGCG CGTCGGTTTC
GCAGCTGTTG CCGGCGAAGC CGTAAATTCC GCTGTACCAG AGCTTTATTC CAAGGCTTTG
GAAGAAAAGA AGATTCGCCC AATGGATCAG CCAGAATTTG ACGTTCAGGA AGTTCCAACG
TCGACTGATG CAGATGCAAG TCTTAAGTTT GTAGCAACAG TTGAGCGTCG TCCAGATTTC
AAGTTGAACA AGTTCAAGGG CGTTGAGATT GAAGTTGAGA AGCCAAAGGT TTCCGACAAG
GATGTCAAGG AGCGCTTGGA AAGTCTCCGT CAGCGTTTTG CTACTTTGGT TGGTGTTGAC
CGTCCTGCAG CTAAGGGTGA TTACACTAAC ATTGATTTGG AAGCTCGTAT CGATGACGAA
GTAGTTGATG CACAAGAGGG CGTAAGCTAC GAAATCGGTT CCGGTGTGTT GCTTGACGGT
TTGGATGAGG CTTTGGATAG CCTTTCTGCC GGTGAAGAAA CCACCTTTGA AGGTACTCTC
GAGTCCGGCA AGCATAAGGG CGAGAAGGCT CAAATCAAGG TTAAGGTTAA TTCCGTAAAG
ACTCAGGAAT TGCCAGAGCT TGATGATGAT TTTGCTCAGG AAGCTTCCGA GTTTGATACT
TTGAAGGATT TGAAGGCAGA TATTCGCAAG GCTTGCGAGC AGGCTGCTGA AGGTCGTCAG
GCAACTAATG CCCGTGACGC ATTCCTTGTT AAGCTTCAAG AAGAAGTTGA AATTCCTGTA
CCAAAGGGTG TTTTGGATAA GGCTGTTTCA GAGCATTTGA AGGGCATGAC CCCTGATCCT
GAAAAAGCTA CCAAGAAGCA GAAGGACGAA GCTCAGCAGG CTGCTGAGAA GGAACTTCGC
GACCAAATGG TTCTTGACGC TTTAGCTGAA CAGATGGATG TGACTGTTTC CCAGGCTGAT
GTCACCAACT TCTTGGTTTC TGTTGCTCAG CAGTACGGCA TGGATCCAAA CCAGTTCATT
AACGCAATCG TTAACAACGG TCAGCTTGGT TCTGCTGTAC AGGAAGTTGC TCGCTCTAAG
GGCTTGCTTG CTGGTATGCG TGCTGTAAAG TTCGTTTCTG GCGGAGAAGC TCTTGACTTG
AGTGCATTCT TGTCTGAGGA TGATGACGAA GACGAAAGCG TGAAGGCTGC TTCTGCTGCT
GCAGAAGTTG CTGACGAACT TTCTAAGTAG
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| Protein sequence | MKISVRNLEP TKVKLTITAD LEDFKPFLEE ARKEIAKQIN VPGFRKGHVP GKIVDQRVGF
AAVAGEAVNS AVPELYSKAL EEKKIRPMDQ PEFDVQEVPT STDADASLKF VATVERRPDF
KLNKFKGVEI EVEKPKVSDK DVKERLESLR QRFATLVGVD RPAAKGDYTN IDLEARIDDE
VVDAQEGVSY EIGSGVLLDG LDEALDSLSA GEETTFEGTL ESGKHKGEKA QIKVKVNSVK
TQELPELDDD FAQEASEFDT LKDLKADIRK ACEQAAEGRQ ATNARDAFLV KLQEEVEIPV
PKGVLDKAVS EHLKGMTPDP EKATKKQKDE AQQAAEKELR DQMVLDALAE QMDVTVSQAD
VTNFLVSVAQ QYGMDPNQFI NAIVNNGQLG SAVQEVARSK GLLAGMRAVK FVSGGEALDL
SAFLSEDDDE DESVKAASAA AEVADELSK
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