| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0850 |
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| Symbol | |
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| ID | 8709375 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | + |
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| Start bp | 961879 |
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| End bp | 962328 |
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| Gene Length | 450 bp |
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| Protein Length | 149 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 646482950 |
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| Product | toxin-antitoxin system, antitoxin component, Xre domain protein |
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| Protein accession | YP_003374067 |
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| Protein GI | 283783313 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3600] Uncharacterized phage-associated protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCATTA TTAATGTAGC GGCAAAAATA TTGGAAATTA TGGGACCAAT GACAACTATG
AAGCTGCAGA AGCTTGTGTA TTATTCTCAA GCGCACAGCT TAGCTACAAC TGGATTGTCA
CTATTTCCGG AAGATTTTGA AGCTTGGACG AACGGTCCGG TTTCATTGGA ACTATTTAAC
AGGCATCGAG GAAGATTCAC AATTCGCAAA GAAGAACTAC TGATTTCTCT TCCAGAAAGA
TGCGCAACTT TAGAATATGA GCAGGTCAAG ATTATAGAGG AAGTGTGCGC AAAACTTGGA
AATCTTACAG GAAATCAGCT CAGCGAAAGA ACGCATAAAG AAGATCCGTG GATTCGCGCG
AGAATCGGCA TATCTGCAAA TCAAGGCAGC GAGGAAATAA TTTCCAAGAA GTCAATGCGA
GATTATTATT TGAAACATCC GATTGCGTAG
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| Protein sequence | MGIINVAAKI LEIMGPMTTM KLQKLVYYSQ AHSLATTGLS LFPEDFEAWT NGPVSLELFN
RHRGRFTIRK EELLISLPER CATLEYEQVK IIEEVCAKLG NLTGNQLSER THKEDPWIRA
RIGISANQGS EEIISKKSMR DYYLKHPIA
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