| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0836 |
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| Symbol | ruvB |
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| ID | 8708836 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | - |
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| Start bp | 947962 |
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| End bp | 949023 |
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| Gene Length | 1062 bp |
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| Protein Length | 353 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 646482936 |
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| Product | Holliday junction DNA helicase RuvB |
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| Protein accession | YP_003374053 |
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| Protein GI | 283783299 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2255] Holliday junction resolvasome, helicase subunit |
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| TIGRFAM ID | [TIGR00635] Holliday junction DNA helicase, RuvB subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGTGAAG AGTATACTTC TGCGCTAAAT ACTGGTGTTG CTGAAGAATC CTTACGCATG
GTTTCTTCAA CGCCTTTAGG AAATGAGCAA CTCAGTGATG AGGAACTTCG TCCTCGCGCA
TTAGAAGGTT TTATTGGTCA ACCAGTTTTA AAAGCGCAAT TGCAACTGTT TTTAGATGCT
GCTAAAAAGC GTGATGTTGC GCCTGACCAT ATGTTATTGG CTGGCCCTCC TGGATTGGGA
AAAACTACAT TAGCAATGAT TGTTGCTAAT GAATTGCAAG TTCCTATTCG AATTACTTCA
GGTCCTGCTA TCCAGCATGC TGGAGATTTA GCTTCTATAC TAAGCGCGCT TGACGCAGGT
GAGGTGTTGT TTATTGACGA AATCCATCGT TTGCCTCGTG CTGCAGAAGA GTTGCTTTAT
ATTGCTATGG AAGATTTTCG CGTTGACGTT ATGGTCGGCA AAGGTCCTGG TGCCTCATCA
ATACCGCTAA CTCTTCCTCG TTTTACTGTA GTTGGAGCTA CCACTAGGGA AGGAATGTTG
CCTTCTCCAT TGCGCGCTCG TTTTGGTTTT ACTGCTCACC TTGATTTTTA TCCTCACGAA
GAGCTTGAAA AACTTATTGA GCGATCTGCT AAAGTCTTAG GAATTCGCCT TATAGATCAA
GCTGCTAAAG AGCTATCGTT ACGCTCTCGT GGCACTCCTC GTATAGCGAA TCGCTTGTTG
AGACGTGTCA GAGATTGGGC TATTGTGCAT GATTTGTCAG AAGTAAATCA TGAAGCTGTT
GTTGAAGCGT TAGCTTTATA CCAGATTGAT ACACAAGGTC TTGATCGACT TGATATTGCA
GTTTTGAAGG CTATGGTTTG TCAGTTTAAC GGTGGACCGG TTGGTCTTAA TAATCTAGCT
GCAATGGTTG GTGAAGAAGC TGAAACTGTT GAAACAGTAT GTGAACCATA TCTAGTGCGT
GAAGGATTCT TAATTCGCAC TCCTAAAGGT CGTGTTGCAA CTAGTAAAGC TTGGAAACAT
TTGGGCTTTA AAGAGCCTAG TAATGTCAGT GAGCTAGCCT AA
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| Protein sequence | MSEEYTSALN TGVAEESLRM VSSTPLGNEQ LSDEELRPRA LEGFIGQPVL KAQLQLFLDA
AKKRDVAPDH MLLAGPPGLG KTTLAMIVAN ELQVPIRITS GPAIQHAGDL ASILSALDAG
EVLFIDEIHR LPRAAEELLY IAMEDFRVDV MVGKGPGASS IPLTLPRFTV VGATTREGML
PSPLRARFGF TAHLDFYPHE ELEKLIERSA KVLGIRLIDQ AAKELSLRSR GTPRIANRLL
RRVRDWAIVH DLSEVNHEAV VEALALYQID TQGLDRLDIA VLKAMVCQFN GGPVGLNNLA
AMVGEEAETV ETVCEPYLVR EGFLIRTPKG RVATSKAWKH LGFKEPSNVS ELA
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