| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0835 |
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| Symbol | yajC |
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| ID | 8709446 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | - |
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| Start bp | 947501 |
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| End bp | 947902 |
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| Gene Length | 402 bp |
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| Protein Length | 133 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 646482935 |
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| Product | preprotein translocase, YajC subunit |
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| Protein accession | YP_003374052 |
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| Protein GI | 283783298 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1862] Preprotein translocase subunit YajC |
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| TIGRFAM ID | [TIGR00739] preprotein translocase, YajC subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGCCTCAAT TTTTCCAGCA GTATGGCATG CTTATTATTC TCGTTGTAGC AATGGTTTGC
ATGATGATGT TCCAGACTCG CAATGCTAAG AAGCGTCAAG CTGAAATGCG TTCCTTCCAT
GAATCTTTGG AACCAGGTAC TGAAATTATT ACAATCGGCG GCATTATCGG CAAGATTGTA
AGCGTAGATA CTCAATATGA AGAGATTGTT ATCGATTCAG AAGGTAGCTT GATGCGAGTA
TCTTTCCGCG CTGTGAACAG ATTGTATGTG CGTCCAGCAT TTATTAGCGA TGAAGAAGCA
GAAGAAGCTG CACAAGCTGA AGAAGCTAAG CAAGATGATG CAAATAAATC TGTAAACGAA
GATAACGAGC CAGTATCAGA ATCTGCAGCT TCTGAAAAGT AA
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| Protein sequence | MPQFFQQYGM LIILVVAMVC MMMFQTRNAK KRQAEMRSFH ESLEPGTEII TIGGIIGKIV
SVDTQYEEIV IDSEGSLMRV SFRAVNRLYV RPAFISDEEA EEAAQAEEAK QDDANKSVNE
DNEPVSESAA SEK
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