| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0834 |
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| Symbol | |
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| ID | 8708932 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | - |
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| Start bp | 946779 |
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| End bp | 947360 |
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| Gene Length | 582 bp |
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| Protein Length | 193 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 646482934 |
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| Product | putative adenine phosphoribosyltransferase |
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| Protein accession | YP_003374051 |
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| Protein GI | 283783297 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0503] Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins |
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| TIGRFAM ID | [TIGR01090] adenine phosphoribosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGCAA CGGATATTAC AGTGAAAACG TTGAAAACAG TAAGCAACGA TGATGCCGCT
TATCTTGCTT CTTTGATTCG TACCGTTCCA GGATTCCCCA ATCCTAGTAT TATATTCCGT
GATTTTCTTC CTATATTTTC AAATGCGCGC TCTTCGCGAA TTCTTATTGA TTCTTTGATT
GATGCCTTGC CTGTGCCAGC TGATTCAATT GATTTGATTG CTGGGCTTGA AGCTCGAGGC
TTTCTTTTTG GACCATTATT GGCATCTCGG TTAGGCAAAG GTTTTCTTGC TATTCGTAAA
GCTGGTAAGC TACCTCCTCC AGTTATTACT GAGTCATACA TGCTTGAGTA TGGTCAGGCA
AGTATTGAAA TTGAAAGCGA CGCTATTAAG CCAGGTCAAC GTGTGCTTAT TGTTGACGAT
CTTATTGCAA CTGGAGGCAC TGCAAAAGCT GCTGCAAATA TTGTCAAGCG CGCTCAAGGA
ATAGTTGCAG GTTTTAGTTT TGTTATTGAA CTTACTGGTA TTAGTGGAAT GAGTGAATTA
TGCGATTATC CTTGCAGCAG TTTAATTACT ATGCCAGCTT AA
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| Protein sequence | MTATDITVKT LKTVSNDDAA YLASLIRTVP GFPNPSIIFR DFLPIFSNAR SSRILIDSLI
DALPVPADSI DLIAGLEARG FLFGPLLASR LGKGFLAIRK AGKLPPPVIT ESYMLEYGQA
SIEIESDAIK PGQRVLIVDD LIATGGTAKA AANIVKRAQG IVAGFSFVIE LTGISGMSEL
CDYPCSSLIT MPA
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