| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0817 |
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| Symbol | |
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| ID | 8709837 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | + |
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| Start bp | 924188 |
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| End bp | 925789 |
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| Gene Length | 1602 bp |
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| Protein Length | 533 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 646482918 |
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| Product | ABC transporter, ATP-binding protein |
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| Protein accession | YP_003374035 |
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| Protein GI | 283783281 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTATTG ACGCACAAGC TTTAACCATT CAGATTGGTG CGCGAACGCT GTTAAATCCT
ACCGATTTTC ACGTCACAAA GGGAGATAAG ATCGGTTTAG TCGGCAGAAA CGGCGCAGGC
AAAACTACGC TTACTCGCGT TATTACAGGA GACATGCTGC CAGCAGGAGG CTCGGTTAGA
GTTAGTGGAG GTTTAGGCTA CTTACCTCAA GACACGCACG CAGCAGACCC AGAGCAAAGT
GTTATAGATC GCATTATGAG TGCTCGAGAT ATTGCTTCTA TCGTTTCGCG TATTCGCAAA
GCGGAAAAAG AAATGACAGA TCCAGATCCA GACATAATGA CTAAAGCTAT GAACCGCTAC
GACAAAGCAA TGCAAGATTT TGAAAAAGCA GGCGGTTATT CAGTGCAATC TGAAGCAATA
TCGATGGCAA CAAGCTTGGG ACTTCCACAA GAAGTTATGC AACAAGCTTT AGGAACACTT
TCAGGTGGTC AACGTCGCCG CATAGAACTT GCTAGAATTC TGTTTTCTGA CGCAGATACA
TTAATTCTCG ATGAGCCTAC AAACCACTTA GACGCAGACT CAATAATATG GTTGCGCAAT
TATCTTAAAC GATTTGAAGG CGGATTCCTA GTAATTTCTC ACTCCACAGA ATTACTAGAC
GAAGTAGTCA ACAAAGTATG GCATTTAGAT GCGCAACTTG CAAAAATAGA CATGTACTCA
ATGGGTTGGA AAGCATACTT GCATCAGCGC GTAGTAGACG AAGAAAGACG TCGTCGCGAA
CGAGAAGTTG CAGAAAAGAA AGCTGAACGC CTTATGAAAC AAGGCATTCG CTTGCATGCT
AAAGCTACAA AAGCAGTTGC TGCTCAAAAC ATGATGCGAA GAGCTGAACG CCTATTAAGC
GAAACAAGTG AAGCTCAAAA ACAAGAAAAA GTTGCAGATA TTCGTTTTCC AGAACCAGCT
GCATGCGGAA AAACTCCAAT TATGGCAAAA GATATTTCCA AAGCGTATGG TTCTAATATT
GTTTTCGCTG GAATTAATCT TGCTATAGAC AAAGGTTCAC GCGTTGTCAT TCTAGGCTAT
AACGGTGCTG GAAAAACAAC AACATTACGC ATTTTGGCAG GAGAAGAAAC AGCAGATACT
GGTGAAGTTC AATACGGACA CGGATGCAAA ATCGGTTATT TTGCACAGGA ACACGATACA
TTAGACTTGG ATTCTACAGT TTTGGAAAAC CTTCAGCATG TTGCACCAAA CCTGGATGAC
ACGCAAGCAC GTTCTATGCT TGGCAGCTTC CTGTTTTCCG GCGACGACGC AATGAAGCCT
GCAAGAGTGC TTTCAGGTGG CGAAAAAACG CGTCTAGCAC TTGCAACACT AGTCACTTCC
AAGGCCAATG TGCTACTACT AGACGAACCT ACTAACAACT TAGACCCAGC ATCTCGAGAT
GAAATACTTA AAGCTATTGC AAAGTATGAG GGAGCAATTG TTCTTGTTAC ACACGATGAG
GGTGCAGTTC AAGCCTTACA ACCTGAGCGA GTGCTACTCA TGCCTGATGG CGACGAAGAC
TTGTGGAATG ACGAATATCT CGATTTAGTT GCCGAAGAGT AA
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| Protein sequence | MPIDAQALTI QIGARTLLNP TDFHVTKGDK IGLVGRNGAG KTTLTRVITG DMLPAGGSVR
VSGGLGYLPQ DTHAADPEQS VIDRIMSARD IASIVSRIRK AEKEMTDPDP DIMTKAMNRY
DKAMQDFEKA GGYSVQSEAI SMATSLGLPQ EVMQQALGTL SGGQRRRIEL ARILFSDADT
LILDEPTNHL DADSIIWLRN YLKRFEGGFL VISHSTELLD EVVNKVWHLD AQLAKIDMYS
MGWKAYLHQR VVDEERRRRE REVAEKKAER LMKQGIRLHA KATKAVAAQN MMRRAERLLS
ETSEAQKQEK VADIRFPEPA ACGKTPIMAK DISKAYGSNI VFAGINLAID KGSRVVILGY
NGAGKTTTLR ILAGEETADT GEVQYGHGCK IGYFAQEHDT LDLDSTVLEN LQHVAPNLDD
TQARSMLGSF LFSGDDAMKP ARVLSGGEKT RLALATLVTS KANVLLLDEP TNNLDPASRD
EILKAIAKYE GAIVLVTHDE GAVQALQPER VLLMPDGDED LWNDEYLDLV AEE
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