| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0807 |
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| Symbol | pyrH |
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| ID | 8709965 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | - |
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| Start bp | 910526 |
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| End bp | 911275 |
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| Gene Length | 750 bp |
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| Protein Length | 249 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 646482908 |
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| Product | UMP kinase |
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| Protein accession | YP_003374025 |
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| Protein GI | 283783271 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0528] Uridylate kinase |
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| TIGRFAM ID | [TIGR02075] uridylate kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTATTG CACAAACGGA TGAAGGAAAG TCCCGTAGGG TTTTATTAAA GCTTTCTGGA
GAAGCATTCG GTGGTGGCGC TGTTGGTATT GATACTCATG TCATTCGTAG GATTGCTGGC
GAAATAGTAG CTGCAGTGAA TCAAGGCGTT CAGGTTGCTA TTGTTGTCGG CGGCGGTAAC
TTCTTTAGGG GAGCAGAACT GCAGCAAGCA GGTATTGATC GTAGCCGTGG CGATTATATG
GGTATGTTGG GCACTGTAAT GAACTGCTTG GCTCTTCAGG ATTTTCTTGA GCAAGCAGGG
CAAGCAACTC GCGTACAAAC TGCTATTACA ATGGGTCAGG TTGCAGAACC TTATATTCCG
TTGAAAGCAA TTCGTCACCT TGAAAAGGGT CGTGTGGTTA TTTTTGGTGC TGGTGCCGGA
ATGCCATATT TTTCTACTGA TACTGTTTCT ATTCAACGTT CATTGGAAAT TCATTGCGAT
GAAGTTCTTA TGGGCAAGAA TGGTGTGGAT GGCGTATATA GTGCTGATCC TCGTAAAGAT
TCTACTGCTC GTAAGTTCCT AACATTAAAC TACAATCGCG CTATCGTTGA TGGTTTAGCT
GTTATGGATG CGTCTGCGCT TTCTATGGCT CGCGATAATA ATCAAAAAAT TCGTGTGTTT
GGTCTTGAGG GCGAAGGTAA CGTAACTAGT GCTCTTGTTG GAGAATCTAT TGGCACATTA
GTGTCTAATG CAGAGCCAAC ATTTGCTTAA
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| Protein sequence | MAIAQTDEGK SRRVLLKLSG EAFGGGAVGI DTHVIRRIAG EIVAAVNQGV QVAIVVGGGN
FFRGAELQQA GIDRSRGDYM GMLGTVMNCL ALQDFLEQAG QATRVQTAIT MGQVAEPYIP
LKAIRHLEKG RVVIFGAGAG MPYFSTDTVS IQRSLEIHCD EVLMGKNGVD GVYSADPRKD
STARKFLTLN YNRAIVDGLA VMDASALSMA RDNNQKIRVF GLEGEGNVTS ALVGESIGTL
VSNAEPTFA
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