| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0783 |
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| Symbol | |
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| ID | 8709016 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | - |
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| Start bp | 886084 |
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| End bp | 887454 |
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| Gene Length | 1371 bp |
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| Protein Length | 456 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 646482884 |
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| Product | hypothetical protein |
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| Protein accession | YP_003374001 |
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| Protein GI | 283783247 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCGAAC AGTCTAAACC TGAAGAAACT ACTAAAACTA CTACCGCGCC AAAGCCAGTT
GCTCCATCTC CAGCAAGCTT CGCGCATAAG ACTCGTGTTG TTGCTCAAGC ACCAACCATT
TCTTATAGTG AAGAGGATAT TAAAGCCGCA AAAACCTTTG GCCGTGTTGA TGAAAATGGC
ACTGTTTACG TTACTGAAAA CGGTGTTGAG CGTGAGGTTG GTCAATACTC CACTGGCACT
CCTGAAGAAG CGTTGACTTT CTATATTCAT CGTTATCTTG ATTTGAAGAT TAAGCTTGAT
CTTTTCGCTA AGCGCTTGGA AGCTTCCAAT GTAAAAGCAA AAGAAATTGA CGAAACGCTT
AATACTTTGA AAGCTGAATT GGAAAATCCT GCTGCCGTAG GCGATATTGC TGCTTTACGT
GCGCGACACG CCGAATTGGC TGCAAAAGGT AATGAAAAGA AGGAAGCAAT CTCTAAAGCT
CGAAAAGAAG CTCTAGAAAA AGCTTTGAAA GAACGTACAA ATATTGTAGA ACGTGCAGAA
TCGTTAGTAG CACAAATGAA TGAATCTACA AACTGGCGTG AATTAAACGA TAAGTTACGT
GCTTTATTTG ACGAATGGCA GGAGCATCAG CGTACTACTA TTCACTTAAA TAAGTCTGAT
GCCGATGCTT TGTGGCAGCG TTTTTCAAAG GCTCGTTCTG CATTCTCTCA GGCTCGTAAC
TCTTGGGTTA AAGAACGTGA GCACGTGCGT AATACTGCTA AGCAGCTTAA GGAAGCTATT
ATTGCAGAAG CTGAAAGCTT AAAAGATTCA AAAGATTGGC GTGAAACTTC TATGAAGTTC
AATGCTTTGA TGGATCGTTG GAAGAAAGCT GGCAATGCTG GTCGTCAGCA CGATGATGCT
TTGTGGGCTA AGTTCCGCGA AGCTGCTGAT GCTTTCTATC ATGCTCGTCA AAATGACCGT
GAAAAGGTTA ATGCTGGAGA ACACGAAAAT CTTGCTAAGA AGGAAGCTTT GCTCGTAAAA
GCAGAGGCTT TGTTGCCAGT AGAAAATGAA GAAGCTGCTA AGAAGGCTCG TAAGGCTTTG
TCTCAGATTC AGGAAGAATG GGATGCTATT GGTTTCGTTC CTCGTGAAGA TATGCGTCGT
ATTGAGTCTC GCTTGAACGA CGTTGATAAA AAGATTAAGG CTGTTGAAGA CGCTGCTTGG
CGTGAGGCTG ATCCTGAAGC TAATGCTCGT AAGTCCAGTT TTGCTTTACA GTTGGAAGCG
CAACTCGAAG AGCTTAACGC TGCTATTGCT AAGGAAACCG ATAATAAGCG TAAAGCTAAG
TTGGAAGCTG AAAAGGCTAC TAAAGAGCAG TGGCTTAGCG CTGTTAAGTA A
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| Protein sequence | MTEQSKPEET TKTTTAPKPV APSPASFAHK TRVVAQAPTI SYSEEDIKAA KTFGRVDENG
TVYVTENGVE REVGQYSTGT PEEALTFYIH RYLDLKIKLD LFAKRLEASN VKAKEIDETL
NTLKAELENP AAVGDIAALR ARHAELAAKG NEKKEAISKA RKEALEKALK ERTNIVERAE
SLVAQMNEST NWRELNDKLR ALFDEWQEHQ RTTIHLNKSD ADALWQRFSK ARSAFSQARN
SWVKEREHVR NTAKQLKEAI IAEAESLKDS KDWRETSMKF NALMDRWKKA GNAGRQHDDA
LWAKFREAAD AFYHARQNDR EKVNAGEHEN LAKKEALLVK AEALLPVENE EAAKKARKAL
SQIQEEWDAI GFVPREDMRR IESRLNDVDK KIKAVEDAAW READPEANAR KSSFALQLEA
QLEELNAAIA KETDNKRKAK LEAEKATKEQ WLSAVK
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