| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0713 |
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| Symbol | |
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| ID | 8709162 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | - |
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| Start bp | 809097 |
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| End bp | 810038 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 646482818 |
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| Product | hypothetical protein |
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| Protein accession | YP_003373940 |
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| Protein GI | 283783186 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1721] Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.689852 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGCGTA CGAAGCGGTT AGTATTATCT GAACCTGCTA AAGCCGTGCG TCGCAAAATT
GAGCTTTTGG ATCAGCGAAT TGATTTGCCT ATTGCGCGTA AAGCTTTAGG CTTATTAGAG
GGAGACCATC CTTCGCACAG ACGTTTTGGC ACAGGTGATG TTATTGACAT ACACGCGTGG
CAGCCAGGAG ATGAAGCTCG CATGATGAAT TGGTCTGCGA GTGCTCGAAC TGGACAACCT
ATGGTGTCTT CTAGAGAGCG TACTTCGTCT TCTCATACTT GGATTGCTTT AGATACAAGC
ATCAATATGA ATGGAGCTTG TGTTTCTGGA GAATCTCTGT ATGAAGTTGC GTCTAACTCT
GCATGCTTTT TTGCATCTTT GAGTTTAAAA CGTCATGATG CTGTTTCTTT GTTGTGTGCA
GATGGAAAAA ACGTTATCAA TGTTCATTCT GCTAGTAATC TTTCTGATTT TGAGCGAAAT
CTAGATTATA CGTTGCTTAA TACCCGTAGG AATACCAGAG ACATTGATGC GTTGCTTACT
TCGTTACTAA AAAATATTGA CAATAATGGT CTGGTAGTTT TAATAACTGA TGAGTATGCA
TTACAAGCTC ATAACTCTGA ATCTTTGCGT AAAATTACGC AAAATCATAA GCTTGTAGTT
ATTGTTGTCT CTCCTATTAA TCCTTTTGAT GCTGCAATTG ATTTGCAAAT ATTTGATGGA
ATTACTTTAC GTAAAGTACC AGTGTTTTTG AAAAAAGAAT CAAATAAAAA TGAAGTCGAA
GCTCGTAGAA ATATTAGAAT AAACGCTTTA TACGATATGC TGCTTGGTGT TCAATCTTCA
ATAATTCATG GTTCTTCAAG TGAAGAAGTG TTCCATATTT CTGCACAAAA AGTGAGCCGT
ACAAATTATC TTGCTGACTC ATTTAACAAG GAGGTTGAAT AG
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| Protein sequence | MMRTKRLVLS EPAKAVRRKI ELLDQRIDLP IARKALGLLE GDHPSHRRFG TGDVIDIHAW
QPGDEARMMN WSASARTGQP MVSSRERTSS SHTWIALDTS INMNGACVSG ESLYEVASNS
ACFFASLSLK RHDAVSLLCA DGKNVINVHS ASNLSDFERN LDYTLLNTRR NTRDIDALLT
SLLKNIDNNG LVVLITDEYA LQAHNSESLR KITQNHKLVV IVVSPINPFD AAIDLQIFDG
ITLRKVPVFL KKESNKNEVE ARRNIRINAL YDMLLGVQSS IIHGSSSEEV FHISAQKVSR
TNYLADSFNK EVE
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