| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0711 |
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| Symbol | |
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| ID | 8708766 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | - |
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| Start bp | 807432 |
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| End bp | 808568 |
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| Gene Length | 1137 bp |
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| Protein Length | 378 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 646482816 |
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| Product | von Willebrand factor type A domain protein |
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| Protein accession | YP_003373938 |
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| Protein GI | 283783184 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.556532 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTAATA ATGTTTGGGA ATACATATGG CCATGGAGAT GGCAATGGCC ATTGCTTTTT
GTTGCAGGCG TTGTTGTTTC TGCATCAATT TTTGCTGTCT TACTAATTTT AGATTCCATT
CGTAGCAATA TTTTAAAAAA GAAGTATAAG AGTCAAACTA GTAATATTAC GCGAAAATTC
TATACTTTTA CTTTTGACAA TGATCTACAA GGAACTACTA CTAGTCATTC ATGGTATATG
TGGCGAATGT TTAGAAGGTT TGCTACGGCT GCATTGGTAG TATCTTTGTG CAGTGCGCTT
GCTGTTGCTT CCAGGCCAGC ACGAGTGTTT AATGCGAACG AGCAAGTTAG TTCTAGAGAC
ATTGTTTTAT GCTTAGACGT TTCAGGTTCT GCTCTACCAT ATGATCGCGA AGTGATTCAA
GCGTATCTTA ATTTTATTGA GCATTTTCAG GGTGAACGCA TTGGATTGAG CATTTTTAAC
TCCACATCTA GGACAGTTTT TCCACTGACT GACGATTATC GACTAGCTAA AAAACAATTG
CAGTATGCTG CAAATTTGCT TGGCGGAGTT CAATCGCAAA GTCGTATTAA TCGTTTACAA
CAACGCCAAT ATCAGGAAAT TTCTGACTGG CTTGAAGGAA CTCAAAATCG CAAAAACGCA
ACATCGCTTA TTGGAGACGG TTTAGTTAGT TGTGCAGCAA TGCTTCCAGG TTTTATTTAT
GGTTCTGTTC ATAATAACCA TAAAATACAA AGCCGTTTTA ATAGAAGTGC TTCCATTGTT
CTTGCTACAG ATAATGTTGT TTCTGGAAAA CAAACTTACT CATTAAAGCA AGCTTTAGAT
TTAACAAAGC AAGCTAAAAT TACTGTCGAC GGATTATATT CTGGCGCAAA ACAGAATGAG
AATGATGACA CTACGTTAGA AATGAAACAG CTTATTGAAT CTCATGGTGG AATTTTCCTT
TCTCAACGCA ATTCTGATTC TGTTATTAAT TTAGTAAAAG AAATTGAAAA AAGACATACA
GCAATTCCTC AAGGCGCTGC TCAGTCTGCA TTTAGTGACG ATCCTGGTCT TTGGGTTTTG
TTTACTGTGT TTAGCGTTGT GATTTGGCTA GCTATTGCAA AGAGGATGAA GCGATGA
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| Protein sequence | MSNNVWEYIW PWRWQWPLLF VAGVVVSASI FAVLLILDSI RSNILKKKYK SQTSNITRKF
YTFTFDNDLQ GTTTSHSWYM WRMFRRFATA ALVVSLCSAL AVASRPARVF NANEQVSSRD
IVLCLDVSGS ALPYDREVIQ AYLNFIEHFQ GERIGLSIFN STSRTVFPLT DDYRLAKKQL
QYAANLLGGV QSQSRINRLQ QRQYQEISDW LEGTQNRKNA TSLIGDGLVS CAAMLPGFIY
GSVHNNHKIQ SRFNRSASIV LATDNVVSGK QTYSLKQALD LTKQAKITVD GLYSGAKQNE
NDDTTLEMKQ LIESHGGIFL SQRNSDSVIN LVKEIEKRHT AIPQGAAQSA FSDDPGLWVL
FTVFSVVIWL AIAKRMKR
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