| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0681 |
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| Symbol | recN |
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| ID | 8710014 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | + |
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| Start bp | 768583 |
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| End bp | 770367 |
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| Gene Length | 1785 bp |
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| Protein Length | 594 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 646482786 |
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| Product | DNA repair protein RecN |
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| Protein accession | YP_003373909 |
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| Protein GI | 283783155 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0497] ATPase involved in DNA repair |
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| TIGRFAM ID | [TIGR00634] DNA repair protein RecN |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTTGAAG AGTTAGAAAT ACGTAATCTT GGGCCAATTT CACATGCGCT TATTACTCCT
TCGTCTCACA TGACAGCTAT TACGGGCGAA ACAGGCGCTG GAAAGTCAAT GCTTTTAAGT
GCTATCAAGC TTATTTCTGG ATCCAAAGCA GAAGTTGCAA GGATTTCACC AAACGCTAAA
GAAGCATGGG TTCAAGGCAT ATTTAGTATT CCTAAAACAA GTGAATTAGT AGATGCTGTT
GGAAAATCCG GTATTGAATT AGAGCCTTCA GAAAATGACG AAAATAAATC AGATATGTAT
GTTTCTAGAA CAGTACCACA AGAAGGTCGT TCAAGAGCAA CAATTTCTGG TTTCGCAGTA
CCAAAAACAG TTCTTGAACA AGTATGCTCA CGATTGATAG TTATTCATGG ACAAAGTGAC
CAATTACGTA TAGCAACAAA TTCAAAACAA CGCGAATTGC TTGATACTGT ATCTAAAAAT
AGTGAATTAC TTAAGCAATA CGCATGTGCG TATCAAGCGT GGAAAGATGC TAAAGAAACA
TGTAATCGAC TAGAAAATCA AGCGTCTTCT TCGCGACAAC GTGCAGATTA CCTTAGAGAA
TCGTTAGCGA GAATACGAGA TGTGAATCCG CTGCCTAATG AAGATAAGGA ATTGCGTGCA
AAAAGAGAAA GAATTGAGAA TTCTGCTCAA ATTGTTAAAG CAGTGAGCAT TGCGCTCGCA
TCCCTTGATT CCAGTCAAAT AGATTATGGT GCTTCAGAAT CATCTGAAGA TGCTTGTTTT
CTTGTAGATA AAGCTTCTCA AGCATTACGA AATATTCGTG TAGATGATTC TTTCAATTCT
ATTGCAAATC AACTTGACGA TATTCATGCT CAACTTGACG ATATTGTAAT GCAGCTTGCT
CAACAGTTGG ATATCGATGT AAGTGAAAAA GATTTAGATG ATTTAAATTC TCGTATTCAT
GATCTTACTG ATTTAACTCG TAGGTGGGGT CCAACATTAG ATGACGTACT TGATTGGTCC
GAAAAAGCTC AGTTTGAACT TGAAGATTTA GATGATTCTC CTGAAGCTAT TGCCAAAGCG
CGTGCTAAGT GTGCTCAACG ATATGATGAT GCTCTTAAAC TTGCTGAAGA ATTATATAAA
ACTCGTTTAA ATGCAGCTCA TGATTTTGGC ACTTTAGTTA GTGAAGAATT ACATTCTTTG
GCTATGCCAG GTGCTCAATT AATTATCAGT GTAAATAGGC GTTGCGAAGA TTTATCTGGT
TCTATTCCGC TTGATTCTAA CGGATGTGAT GATGTAGAGT TTTTGTTCCG ACCATTTCCT
GCTTCTTCAG ATTTGCCGAT GAGCAAAAGT GCTTCTGGTG GTGAATTAAG TAGGCTTATG
CTTGCAATTG AGCTTGTTGT TGCGAAGTTG ACAGATTGCG ACGAAGAAAA TATGACATTT
GTTTTCGACG AAGTAGATTC TGGTGTTGGT GGTGTTGCGG CAGTAGAACT CGGTAAACGT
TTGGCTCAAC TTTCTCAACA TGCTCAAGTT ATTGTTGTTA CTCATTTAGC TCAGGTTGCT
TCTTTTGCAG ATGCACAATT TGCAGTACAA AAAAATCTTG TTGAGAATAG TGAGAATAGT
TCTTCTGCTA TAGTTGCGGA TACTTCTGTT ATTGAGCTTA ATGATTTGAT GCGTGAGCAA
GAGATTGCTA GGATGCTTGA TGGAAGTGAA TCAAAAACTT CATTAGAACA TGCTCGTGAG
CTATTGAGTG CAAGTAGGAA GATCATTGAT GGATTTACAA AATAA
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| Protein sequence | MLEELEIRNL GPISHALITP SSHMTAITGE TGAGKSMLLS AIKLISGSKA EVARISPNAK
EAWVQGIFSI PKTSELVDAV GKSGIELEPS ENDENKSDMY VSRTVPQEGR SRATISGFAV
PKTVLEQVCS RLIVIHGQSD QLRIATNSKQ RELLDTVSKN SELLKQYACA YQAWKDAKET
CNRLENQASS SRQRADYLRE SLARIRDVNP LPNEDKELRA KRERIENSAQ IVKAVSIALA
SLDSSQIDYG ASESSEDACF LVDKASQALR NIRVDDSFNS IANQLDDIHA QLDDIVMQLA
QQLDIDVSEK DLDDLNSRIH DLTDLTRRWG PTLDDVLDWS EKAQFELEDL DDSPEAIAKA
RAKCAQRYDD ALKLAEELYK TRLNAAHDFG TLVSEELHSL AMPGAQLIIS VNRRCEDLSG
SIPLDSNGCD DVEFLFRPFP ASSDLPMSKS ASGGELSRLM LAIELVVAKL TDCDEENMTF
VFDEVDSGVG GVAAVELGKR LAQLSQHAQV IVVTHLAQVA SFADAQFAVQ KNLVENSENS
SSAIVADTSV IELNDLMREQ EIARMLDGSE SKTSLEHARE LLSASRKIID GFTK
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