| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0669 |
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| Symbol | |
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| ID | 8710035 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | + |
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| Start bp | 752541 |
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| End bp | 753572 |
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| Gene Length | 1032 bp |
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| Protein Length | 343 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 646482774 |
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| Product | cation diffusion facilitator family transporter |
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| Protein accession | YP_003373897 |
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| Protein GI | 283783143 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1230] Co/Zn/Cd efflux system component |
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| TIGRFAM ID | [TIGR01297] cation diffusion facilitator family transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCATAATC ATAACGATGT AATTCAAACT AACGGCACTG GTTCACGCTC AAGCAGTGTG
AATGCAAATG TCAACTCTTC CGATACTAAT TACAATAATG CCAACGCAGC TTCCCAAGCA
GAAGCAATTC ACGCAAGTCA TGCACATCAG CATCGTTTGC TTCTTACGCT TTCTCTTACT
GCAACTGTGT TCTTTGCTGA GGTAATTGGT TCTTTCATAA CCAATTCCTT GTCGCTTCTT
ATAGACGCAG GTCATATGCT TACAGACATT TCGGTTCTTG CAGCTTCAAC AGTTACTGCA
ATTCTTATGC GTCGTCGTCC AAATAGTAAG CGCACGTGGG GTTGGGCGCG TCTTGAGGTT
ATTACAGCTG CTGCGGGAGC TCTTATTTTA CTGCTTGTAG GAGTGTATGC TCTTGTTGAA
GCTGGAATGC GTCTTTTTGG TAGTGGCCAT CAAGGCATTC ACGATGTAAA TCAGCTGCTA
TTCTTTGGTA TCCTTGGTTT AGCTGCGAAT TTAGGTTCTC TTGTAATTCT TATGTCTCAA
TCGCAAGACA ATATGAATAT GCGTGCTGCT TTTCTTGAGG TTATGAACGA TGCTCTTGGA
TCTGTTGCAG TTGTAGTCTC AGCTATTGTA ATGATGAGTA CAGGTTGGGC AGGTTTTGAT
GCTTTAGCTG GCGGTATTAT TGCGCTTCTT ATGATTCCTC GTGCGTTAAA GCTTCTTAAG
AATGCTGTTA AGGTTCTTCT TGAGCAGACT CCTGAAGGTC TTGATTTAAA CAAAGTTCGT
GAACATCTAG AGCATGTTCC TCATGTTCTT GCAGTTCATG ATTTGCACGC TAGTACTGTC
TCTACTGGTA TGCCGATTTT TATGGCACAT GTTGTTGTGG ATCCTAATAT GACAATGTCT
CAATGCTCTC ATGTGCTTTC TCAGCTTCAG GACTGCTTAC GCGAACATTT TCCTGTTTCT
GTGTCTCACA CTACTTTTCA ACTTGAGCCT AAAGGCTATA CAACTTCCAG TGCTTCAGAG
CATCATGAAT AG
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| Protein sequence | MHNHNDVIQT NGTGSRSSSV NANVNSSDTN YNNANAASQA EAIHASHAHQ HRLLLTLSLT
ATVFFAEVIG SFITNSLSLL IDAGHMLTDI SVLAASTVTA ILMRRRPNSK RTWGWARLEV
ITAAAGALIL LLVGVYALVE AGMRLFGSGH QGIHDVNQLL FFGILGLAAN LGSLVILMSQ
SQDNMNMRAA FLEVMNDALG SVAVVVSAIV MMSTGWAGFD ALAGGIIALL MIPRALKLLK
NAVKVLLEQT PEGLDLNKVR EHLEHVPHVL AVHDLHASTV STGMPIFMAH VVVDPNMTMS
QCSHVLSQLQ DCLREHFPVS VSHTTFQLEP KGYTTSSASE HHE
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