Gene HMPREF0424_0662 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHMPREF0424_0662 
Symboleno 
ID8710021 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGardnerella vaginalis 409-05 
KingdomBacteria 
Replicon accessionNC_013721 
Strand
Start bp745350 
End bp746645 
Gene Length1296 bp 
Protein Length431 aa 
Translation table11 
GC content49% 
IMG OID646482767 
Productphosphopyruvate hydratase 
Protein accessionYP_003373891 
Protein GI283783137 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0148] Enolase 
TIGRFAM ID[TIGR01060] phosphopyruvate hydratase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCAGCTA TTGAAAGCGT ATATGCACGC GAAATTTTGG ATTCTCGTGG AAATCCTACT 
GTTCAGGTTT ATTTGGAGAC CGAAGATGGC GCTCAGGGTA TTGGTTTAGT GCCTTCTGGT
GCTTCTACTG GTGAGGCTGA AGCTTGGGAA CGTCGCGATG GCGACAAGTC CCGTTATCAA
GGCAAGGGCA CGTTGGAAGC TGTTAAGGCT GTCAACGAGG TAATTGCACC TAAGGTTATT
GGCATGGATG CCACCGATCA GCGCGCTCTT GATGAGACGA TGATTGAGCT TGATGGCACG
CCAAACAAGG GCAAGCTTGG TGCTAACGCA ATTCTCGGCG TTTCCCTCGC TGCTCTCTAC
GCTGCTGCTG AATCCGCTCA GCTTCCGTTG TACCGCTACA TTGGCGGCAC CAATGGTCAC
ATTCTTCCAG TTCCAAACAT GAACATCATG AACGGTGGTG CTCACGCTGA TTTCGCAACC
GATATTCAGG AGTACATGAT TTCTCCTTAC GGTTTCGCAA CCTACAGCGA TGCTTTGCGC
GCTGGTGTTG AGGTTTATCA CACCTTGAAG AATGTTTTGA AGAAGGAAGG CTTGGCTACT
GGTCTTGGCG ACGAAGGTGG CTTCGCTCCA AAGATGAAGT CCAATGAGGA TTCCTTGAAG
TACATCATGG ATGCAATTGC AGCCGCTGGC TACGAGCCAG GCAAGCAGAT TGGTATTTCT
CTTGACGTTG CTTCTTCTGA GTTCTACAAC AAGGAAACTG GTAAGTATCG TTTCGATGGC
GAAGAGCGCG AATCTGCTTA CATGCTTGAT TACTACGAGA AGCTCATCAA CGAGTATCCA
ATCGTTTCCA TTGAAGATCC ATTCCAGGAA GAAGGATGGG ATGATTGGGC AGAAATCACC
AAGCGTCTTG GTGATCGTTT GCAGTTCGTT GGCGATGACT TGCTTGTCAC CAATCCAAAG
CGTTTGGCTA AGGGTATTGA GCTTGGTGCA GCTAACTCCT TGCTCGTGAA GTTGAACCAG
ATTGGTTCCG TTACCGAGAC TCTCGACGCT ATTGAGCTTG CAACCAAGAA TGGCTTCACT
TCCATGGTTT CTCACCGTTC TGGCGAAACC CCAGATACCA CCATTTCTGA TCTTGCTGTT
GCTAAGAACA CCGGCCAAAT CAAGACTGGT GCTCCTGCTC GTGGCGAGCG TATTGCTAAG
TACAACCGCT TACTTGAGAT TGAGGAAGAG CTTGGTTCTA CTGCTCAATA TGCTGGTTAC
AGCGCATTCA AGGCTTGCAA GAAGTATATG AAGTAA
 
Protein sequence
MAAIESVYAR EILDSRGNPT VQVYLETEDG AQGIGLVPSG ASTGEAEAWE RRDGDKSRYQ 
GKGTLEAVKA VNEVIAPKVI GMDATDQRAL DETMIELDGT PNKGKLGANA ILGVSLAALY
AAAESAQLPL YRYIGGTNGH ILPVPNMNIM NGGAHADFAT DIQEYMISPY GFATYSDALR
AGVEVYHTLK NVLKKEGLAT GLGDEGGFAP KMKSNEDSLK YIMDAIAAAG YEPGKQIGIS
LDVASSEFYN KETGKYRFDG EERESAYMLD YYEKLINEYP IVSIEDPFQE EGWDDWAEIT
KRLGDRLQFV GDDLLVTNPK RLAKGIELGA ANSLLVKLNQ IGSVTETLDA IELATKNGFT
SMVSHRSGET PDTTISDLAV AKNTGQIKTG APARGERIAK YNRLLEIEEE LGSTAQYAGY
SAFKACKKYM K