| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0637 |
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| Symbol | dprA |
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| ID | 8708799 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | - |
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| Start bp | 709307 |
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| End bp | 710851 |
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| Gene Length | 1545 bp |
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| Protein Length | 514 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 646482743 |
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| Product | DNA protecting protein DprA |
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| Protein accession | YP_003373867 |
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| Protein GI | 283783113 |
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| COG category | [L] Replication, recombination and repair
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0758] Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake |
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| TIGRFAM ID | [TIGR00732] DNA protecting protein DprA |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.3144 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATACTA AGAGCATAAA CAACACGGAT AACACTAAAG AAACCATTAG TACATCTAGC
GATTTTTCTT CACCAGACGA AGAAACAATA TCTCGTGCAA TACTTACATT CTGCCTTGAA
GGAGCGGATG CAATTATGTA CACACTACTA TTGGGATCTA AAAGCGCTAA AGAAATTGTT
TCTCTATTAA AAACAATTGT GAAAAATTAT ACGAAACAAC AATCAGCATG CTCAGCTCAA
CAAATGCAAC TTCCAATTAT TAGTGAAGTA GCAGATCAAG AAAACGATGC CAATTCTAAA
ACTTTTACCT CAAGAAAACG TAACAAAAAT CAAGAATTAG TATCTACAAT GTTAAGTTTC
ATAAAAAAAC ATAAAGAGCT TGCTCTCTTA GAAAATTATT TCAAGAAGGG CTTAACAGCG
TGGGGTTATC ACAACAATAA TGCGCCTAAA TCTTTAGAAG TGCTACACAA TTCTATTTCA
ACATGGTGCG TTCGATTATT GCATTTGCCG ACATGGAATA GTGAATCACT ATGTCAATGG
TTCACTTGTG GCGGAAAGCA ATGGATTATT GCACCACACA GCAAATATTG GCCGAAACAA
TTACAAGATT TGGCTTTTCA GAGTCATTTC TCACCACCTT TATGCTTGTG GGGCGTAGGG
AATCCACAAA CATTAACACA ATGTCATAAT CCACTTGCTA TTGTTGGTTC ACGCTCTTGC
ACAGACTACG GAAGAGAACT CGCATATCAA TTTGCTTATG ATTGCGCTTC GAAAGGTCAT
ACTGTTATTT CTGGTGGAGC GTACGGAATT GATGCAGCAG CACATTGGGG CGCATTAGAT
GCACAAGATA TAGATGAAAA TAAGCCTACA GGAAAAACCA TTGCTGTATT TGCAGGAGGA
TTAAATCATA TGGGCCCCAG ATGCAATTAT CAGCTTTTTG AACAAATTAT TGCAAAAGGC
GGAGTGTGTA TTAGCGAACT ATGCCCAGAT ACAACACCAG TAGGCCACAG ATTTTTATTG
CGAAATAGAA TTATTGCAGC TCTAGCATCA AAAATTATAG TTGCTCAAGC AAGATTACAA
TCCGGAGCGC TAAATACTGC AACATGGGCA ACGGATTTAA ATCGCGAACT ATACGCTATA
CCAGGAGATA TCAATCAGCC TAATAATGCG GGATGCAACA AGCTAATACA CGATTCACAA
GCTATAATAT TGTGTTCAAC TCAAGATATA GATATTCTGT TTCCTCAATC TCATCACTAC
TTTGCTTATT CTCAACCTAA ACCAGAAAAA TTAAGTATAG ACTATAAAAA TTATGACAAT
ACACAAAAAC TAATTATCGA CGCAATTACA ACGTGCAAAC GCAAACACGA ACTTGCAAAT
GTTGACAGAA TATACGAAAT AATAAAAACT TCTTACAAAG AAAAACAATT AGATTACATA
CCATCTATTG CTGAAATTTC TGGAAAAATT GCATTGCTAG AATTGGAAGG AATTATTGTA
CAAAATAAAG AAAATTTAAC ATTATCACAG CAAAAAGTAG CGTAA
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| Protein sequence | MNTKSINNTD NTKETISTSS DFSSPDEETI SRAILTFCLE GADAIMYTLL LGSKSAKEIV
SLLKTIVKNY TKQQSACSAQ QMQLPIISEV ADQENDANSK TFTSRKRNKN QELVSTMLSF
IKKHKELALL ENYFKKGLTA WGYHNNNAPK SLEVLHNSIS TWCVRLLHLP TWNSESLCQW
FTCGGKQWII APHSKYWPKQ LQDLAFQSHF SPPLCLWGVG NPQTLTQCHN PLAIVGSRSC
TDYGRELAYQ FAYDCASKGH TVISGGAYGI DAAAHWGALD AQDIDENKPT GKTIAVFAGG
LNHMGPRCNY QLFEQIIAKG GVCISELCPD TTPVGHRFLL RNRIIAALAS KIIVAQARLQ
SGALNTATWA TDLNRELYAI PGDINQPNNA GCNKLIHDSQ AIILCSTQDI DILFPQSHHY
FAYSQPKPEK LSIDYKNYDN TQKLIIDAIT TCKRKHELAN VDRIYEIIKT SYKEKQLDYI
PSIAEISGKI ALLELEGIIV QNKENLTLSQ QKVA
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