| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0618 |
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| Symbol | |
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| ID | 8708931 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | + |
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| Start bp | 685173 |
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| End bp | 686057 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 646482727 |
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| Product | dinuclear metal center protein, YbgI family |
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| Protein accession | YP_003373853 |
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| Protein GI | 283783099 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0327] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00486] dinuclear metal center protein, YbgI/SA1388 family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTAGAT TAAGCAAAGT AATTGAAGCT ATAGAAACAT TGTACCCATT AAGCTTTGCT
GAAGAGTGGG ATGAGCCTGG TCTTATTGTT GGAGACTTGA ATTCCCAAAT TCAGCGAATC
GTATGTGTTA GTGATTCTAC GATTAGCGCA GTTGATCGAG CGTTATCAAT GGGTGCAAAC
CTATTAGTGA CTCATCATCC GCTATTTTTC AAAGCTGTGC ATGGAGTTTC AAACGAAACT
GTTCGTGGCG AAATTGTGCA GCGCTTAATT AGTAATAATT GTGCGCTATG GGTTGGTCAC
ACTAATGCGG ATGTCGCGTG GCGCGGAGTT GCTCATGCTG CGGCAGAGTA TTTTGGTCTT
CATAATTTGC GTCCAATTGT TGTTTCTAAA CAGATTGATT CTGCTGGACG TAACATTGGC
TTAGGCAGAA TTGGTGTTTT GGATGTGCCA ATATCATTGC GTGATTTTGC GCAAAATGTT
TTTAACGTTC TTCCTCATAC AAAAGTTGGT GTTCAAGTTG CTGGAAATCT TGATGCGAAA
GTTAGTACAG TAGCTGTTTT GCCTGGTTCT GGGGAAAGCT TGTTAGATGA AGTTCGCAGG
GAAAAAGTTG ACGTATATGT TACAAGCGAT TTGCGTCATC ATCCTGCACT TGATGCAATT
GAGCGAGCTA AATATGAATC GAAACTGCGT CTTTCTTCTG GTGAAGATTA CATTCAACAC
ACATATCCTA TGATTATTAA CACTTCTCAT AGTGCTATTG AATCATTGTG GTTTACTTAT
GCGATTAATG ATATTGCTGA TTGCATAGAA GAAATGTATG GAGAGCGTCC AGAAGTTGCT
TGGTTAGGTG AAGCTTGCGA TCCATGGAAT TACGTTATTA ATTGA
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| Protein sequence | MIRLSKVIEA IETLYPLSFA EEWDEPGLIV GDLNSQIQRI VCVSDSTISA VDRALSMGAN
LLVTHHPLFF KAVHGVSNET VRGEIVQRLI SNNCALWVGH TNADVAWRGV AHAAAEYFGL
HNLRPIVVSK QIDSAGRNIG LGRIGVLDVP ISLRDFAQNV FNVLPHTKVG VQVAGNLDAK
VSTVAVLPGS GESLLDEVRR EKVDVYVTSD LRHHPALDAI ERAKYESKLR LSSGEDYIQH
TYPMIINTSH SAIESLWFTY AINDIADCIE EMYGERPEVA WLGEACDPWN YVIN
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