| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0607 |
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| Symbol | pyk |
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| ID | 8709397 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | + |
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| Start bp | 665414 |
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| End bp | 666853 |
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| Gene Length | 1440 bp |
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| Protein Length | 479 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 646482716 |
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| Product | pyruvate kinase |
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| Protein accession | YP_003373843 |
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| Protein GI | 283783089 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0469] Pyruvate kinase |
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| TIGRFAM ID | [TIGR01064] pyruvate kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTAAAG CCAAAATCGT TGATACTATT GGTCCAGCTA CCGAATCCTT GGAAGGTATT
ACCAAGCTTG TTGAAGCCGG TATGGATGTT GCTCGTTTGA ACCGTTCTCA CGGCACTCCT
GAAGATCATT TGCGCGTTTA CAACAACGTT CGTGCAGCTT CCAAGTCCAC TGGCCGCAAT
GTTGCTGCTC TTGTTGATTT GCAAGGTCCA AAGATTCGCT GCGGTTGGTT CAAGAAGAAC
GCTGAAGGCG AAGATAAGGT TTATTTGGAA GAAGGTCAGG AGTTCATCAT CACTACTGAT
GATGTTGAAG GTGACGAGCA CCGCACTTCT ACAACTTTTA AGGGCTTGCC AGGAGATTGC
CACGCAGGCG ACCCAATCCT TATCGATGAC GGTAAGGTTC GTCTTGAGGT AACCAAGGTA
GAAGGCAACG ACGTTCACAC TAAGGTTATT GTTGCTGGTC CAGTTTCCAG CCACAAGGGC
ATTAACCTCC CAGGTGTTGC AGTTTCTCTT CCAGCTTTGA CTGAAAAGGA TGAGGCTGAT
CTTCGTTGGG CTATTCGCAC CGGCGCTGAC ATTATTGCTA TGTCCTTCGT GCGTTTCGCT
ACCGATATTG ATCGCGCTCA CGAAATCATG GACGAAGAAG GTCGTCGTAT TCCAATCGTC
GCCAAGATTG AAAAGCCACA GGCTGTTGAA AACTTGGAAG AGATTGTTAA GACCTTCGAT
GGCATTATGG TTGCTCGTGG TGATATGGCT GTTGAAATGC CTCTCGAAGA GGTTCCACTG
GTCACCAAGC GTTGCATCGA GCTTTCTCGT CGCTATGCAA AGCCAGTTAT CGTTGCTACT
GAAGTTCTTG GCACAATGGT TAACTCTCCA GTTCCAACTC GTGCAGAAGC TTCTGACTGC
GCTAACGCTG TTCTCGACGG TGCTGACGCA ACAATGACTT CTAACGAAAC TGCTGTTGGT
AAGTACCCAG ATGTTACCGT AAAGACCATG TCCCGTATTT CTCAGTACGC AACTGAGCAC
GGCTATGATC GCATTCCTGC TGTTGAGCTT GATATGTCTA GCACCGGTGC TGTTTCTTCT
GCAGCTGTTG ATTTGGCAGA TAAGCTTAAT GCTAAGGCTA TTGTTGCTTA CACTCAGACT
GGTCGCACAG TTCATCGTAT TTCTCGTGAA CGTCCAACCG CTCCAATCTT TGGCTTGACT
AACAATGAGC ACACTTATCG TTGGTTGGCT TTGAGCTGGG GCACTGAAGG CTTCTTGATT
GATGAAGATT ACCATGACAT GAATCGTCAC GATTTGATGA TCTTCACCGA CAAGGTTCTT
CGCGAAGCCG GTAAGGTTTC CGATGGTGAT CAGATTGTTA TCTTGAGCAC TGCTCAGGGT
GAACGCCAGG CTGGTCGTAC TGACTCCATC TACGTTCACA CCGTTGGTGC TTGCGACTAA
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| Protein sequence | MRKAKIVDTI GPATESLEGI TKLVEAGMDV ARLNRSHGTP EDHLRVYNNV RAASKSTGRN
VAALVDLQGP KIRCGWFKKN AEGEDKVYLE EGQEFIITTD DVEGDEHRTS TTFKGLPGDC
HAGDPILIDD GKVRLEVTKV EGNDVHTKVI VAGPVSSHKG INLPGVAVSL PALTEKDEAD
LRWAIRTGAD IIAMSFVRFA TDIDRAHEIM DEEGRRIPIV AKIEKPQAVE NLEEIVKTFD
GIMVARGDMA VEMPLEEVPL VTKRCIELSR RYAKPVIVAT EVLGTMVNSP VPTRAEASDC
ANAVLDGADA TMTSNETAVG KYPDVTVKTM SRISQYATEH GYDRIPAVEL DMSSTGAVSS
AAVDLADKLN AKAIVAYTQT GRTVHRISRE RPTAPIFGLT NNEHTYRWLA LSWGTEGFLI
DEDYHDMNRH DLMIFTDKVL REAGKVSDGD QIVILSTAQG ERQAGRTDSI YVHTVGACD
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