| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0596 |
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| Symbol | |
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| ID | 8708954 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | - |
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| Start bp | 653012 |
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| End bp | 653764 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 646482705 |
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| Product | response regulator receiver domain protein |
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| Protein accession | YP_003373832 |
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| Protein GI | 283783078 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTAAACG CTCCATCAGC TAGCGTAAAT GCTCGTACAA TTCTCGTTGT TGAGGATGAG
CCAGATCTTG CTACAGCAAT TGCACAACGC ATTACTGCAC AAGGCTGGAG AGCAAGAGTC
GCTACAGATG GAGCGTCTGC TGTTAGAGCT GCCGAACAAC TAAAACCTGA TCTCATAATT
ATGGATATTA TGCTTCCTAT TATGGATGGG ATTGAAGCAA CTCGACGAAT TATCTCCAAA
ATGCCTGTTC CTATCCTCAT GTTAACAGCA CGCGACGCAG AAGCCGATAA AATTGTTGGC
TTAAGCGCAG GCGCAGATGA TTACATGACT AAACCATTTT CGCCACGTGA GTTAATTGCT
CGTTGCGCAG CATTGCTGAG ACGCGTAGAA CGCGCATCGC AAATAGCAAA GACAATGGAA
CATGAACGCA CAATTAATTT TGGGTCACTT ATTATTAGAC CTCGTCAAAG ACTTGTAACT
TTAAACGACA AAGAGGTACA TTTTACACCA ACTGAGTTTG ACTTGCTCGC TACTCTAGCT
CGTCATCCTC ATACTGTATT TAAGCGTGAA AAGTTACTTG AAGAGGTGTG GGATTGGCCG
GATGCTTCTG GAACTCGCAC AGTAGATTCA CACATTAAGT CTTTGAGACA TAAAATTGGA
TCGGAATGGA TTCGTACTGT ACACGGAATA GGATACGCAT TCGAGCCACC TATTAGTGAT
TACGACAAAG TTCTGCAATC ACAAGTTTCA TAA
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| Protein sequence | MLNAPSASVN ARTILVVEDE PDLATAIAQR ITAQGWRARV ATDGASAVRA AEQLKPDLII
MDIMLPIMDG IEATRRIISK MPVPILMLTA RDAEADKIVG LSAGADDYMT KPFSPRELIA
RCAALLRRVE RASQIAKTME HERTINFGSL IIRPRQRLVT LNDKEVHFTP TEFDLLATLA
RHPHTVFKRE KLLEEVWDWP DASGTRTVDS HIKSLRHKIG SEWIRTVHGI GYAFEPPISD
YDKVLQSQVS
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