| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0595 |
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| Symbol | |
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| ID | 8709957 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | + |
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| Start bp | 650859 |
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| End bp | 651752 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 646482703 |
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| Product | hypothetical protein |
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| Protein accession | YP_003373830 |
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| Protein GI | 283783076 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1040] Predicted amidophosphoribosyltransferases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTGGGA GACGCAAGGT TATAAACCAC CAAAACAAAA AGAAGTATAG AAGCGTGACA
TCTCATGGGG GATTAGCATG TCACGCATCT GTACCTTGTG GTGTATGTGA AAACAAGGAT
GTTGATTTTA TAAATTGGCG TTTTGCTAGT TGGAAGAATG TAGCGATTGC TTTATTTAAT
TTATTTTTGC CTCGCGCATG TGCAGGCTGT GATACTCCAG ATTATATATT GTGTGAAAAC
TGCAAGAAAG CGTTGCAATG CTGGAAACGT GCACCATTTG CCAGAACAGT ATGTGGATAT
CGCTACGCGT GTGGTTCGTA TTCTACGGTT GTTCGCCGCT CAATATTATT GTGGAAGGAT
CATTTCGATA TTGCATGTGA CAAAATATTT GGTGAACTTA TTGGCGATTT AGTAGTAGAA
GTTATATCTA AATTTTTGCG CTCGCATTCT TGTTATATAA GTGAAAAACC TATATTTGTT
ATACCAGTCC CGTCGTCTAA GCATTCATCA AGGCATCGTG GACGTAAGCA TATGTTGCCT
GTTGCAAATT GTGTTGCTAA ACGATTGTGT AATAGTGGCA TTAGAGCATA CGTTTTAGAT
ATTGTGAGTA TGGATGCTAG AATTACTGCG AAATCAGTGC AAACTTTCGG TTTTCGCGGA
AGGTCTAACA GAATTTCTAA GGCGTTTAGC ATCGATTTTA AAGAATTGAG AAAGCAAAAG
TTTGAAAATC AACGCGAGTA CAAAGCTATT GTATTGGATG ATATTGTAAC TACTGGCTCA
ACTATGAATA GCTGCGTTTC AACTTTACAG AATAGTGGAA TTACTGTTTT AGCATGCTTT
TCTTTAGCAT GTGTATGCAA TAAGGATAAT CGTACAGCAA ATTACAAATG TTAG
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| Protein sequence | MVGRRKVINH QNKKKYRSVT SHGGLACHAS VPCGVCENKD VDFINWRFAS WKNVAIALFN
LFLPRACAGC DTPDYILCEN CKKALQCWKR APFARTVCGY RYACGSYSTV VRRSILLWKD
HFDIACDKIF GELIGDLVVE VISKFLRSHS CYISEKPIFV IPVPSSKHSS RHRGRKHMLP
VANCVAKRLC NSGIRAYVLD IVSMDARITA KSVQTFGFRG RSNRISKAFS IDFKELRKQK
FENQREYKAI VLDDIVTTGS TMNSCVSTLQ NSGITVLACF SLACVCNKDN RTANYKC
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