| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0580 |
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| Symbol | |
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| ID | 8708826 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | + |
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| Start bp | 627782 |
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| End bp | 629227 |
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| Gene Length | 1446 bp |
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| Protein Length | 481 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 646482689 |
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| Product | transporter, major facilitator family protein |
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| Protein accession | YP_003373816 |
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| Protein GI | 283783062 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.593311 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATGATTG GGACTAAACG ATTTGATTGT TCTTCTGTGG ATCCTTATGA TGACCCAGAA
AAGCGCGATA AGGTTGCTGT TCGTGCGTTA ATACTACTGC TTATTACATT TGTTATTAGC
ACCTTGTGCT TGCAAGGTTT CAATCTTGTT TATAAACAAG TTGGTATAGA TGTGAAAGCT
GTTGATCAAG CGCCTCTTAT AACTGGTTTA CCTGGCATTA TTTTAGGAAT TGTATGCTTT
ATTTACGGTT CTTTAGGCGA CTTTGTGTCA TTAAAAAAGC TAGTAACTAT TGGATTAACA
TCTTTGTTTA TAGGCTCAGT TTTTGGATTT GTAGCTAATT CTTGTTTTGA GCCAAATTTG
TGGACAGTTA TTGCTGCTCG TATTATGCAA ACAACTGGTG AACAAGTAGC AGGTTCATCA
TTCTTAGTAA TTGCAACAAA ATATTTGCGA AATGATTTGA AAGTTATCTT CTTCGGATTA
TTTACAGCAT CGTACCAGCT TTCTGCATGT ATTGGAGTGT TTTCAGCGGG ATTGTTAAGC
TCTATTGCTT GGCAATATTT ATTCTTAATT CCAGCATTAA CTATTCTAAT ATTGCCGGCA
TTATTGCATT ATTTACCAAC AAAAAACGGC AATGGTAAAA AAATTGATGT TGTTGGTTTT
ACAGTCTTTG GATTTGCTGT TGCATCTCTT ACATTGTTCA TTTCATACAG AAACTTGTTG
ATGCTTATTT CAGCAATTAT ATTGTTTATA ATTTTTGGTA TTTACATTAG TAAAGCTAAA
GAGCCGTTTG TTACACCAGC TTTCTTTAAA AATATTCGTT GGCTTTCTGG CATAATTTTG
ATGGGCATAA TATACTTCAC AAATTATTGC ATAAGCCCAC TGTTCAATAG AGTTGGAAAA
ACTTTGTATA ACATGACTAC TTCACAAGTA GCTTCTTATT TAGTTTGGGC TTTTATTGTT
GCTGCAATAT TCGGTTCATG CTCAGGCTTA ATAATTAGTC GTATAGGAAG AAAAACAGGT
TTATTATTAG CAATATTGTT TATACTTTGC GGATGGATTG GTATTGCAGT ATTAATAAAT
TCTGGATTCT TGGCTATAGC TTTGTGTGCA TGCATTTATT ATGCAGGTTG TGGAATGGTG
TATTCTCCAC TGGCCTCAAC AATTCTTTCA TCTCTTCCAG TTGAAGAATC TGGCAGAGGG
TGCGGAATGA ATGATTTAGT TATTAGTGTT TCTGCGTCTG TTGGTGTAGT AATTTTTGAC
GGAATATTAG ATAAAAACAT GCTGAGTGGA AATTCTATAA CGGGTGCTTC TGGTATTTCG
TCTGGATTTG CAAACATATC TCTTATGTGT GCTGCTGTTG CATTATTAGG AATTATCGTA
TTTACATTCA GAAACTTTAT TACTAAAGAA AGCAATGCAA TTGAAGTAAA CGAAGATCAA
GAATAA
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| Protein sequence | MMIGTKRFDC SSVDPYDDPE KRDKVAVRAL ILLLITFVIS TLCLQGFNLV YKQVGIDVKA
VDQAPLITGL PGIILGIVCF IYGSLGDFVS LKKLVTIGLT SLFIGSVFGF VANSCFEPNL
WTVIAARIMQ TTGEQVAGSS FLVIATKYLR NDLKVIFFGL FTASYQLSAC IGVFSAGLLS
SIAWQYLFLI PALTILILPA LLHYLPTKNG NGKKIDVVGF TVFGFAVASL TLFISYRNLL
MLISAIILFI IFGIYISKAK EPFVTPAFFK NIRWLSGIIL MGIIYFTNYC ISPLFNRVGK
TLYNMTTSQV ASYLVWAFIV AAIFGSCSGL IISRIGRKTG LLLAILFILC GWIGIAVLIN
SGFLAIALCA CIYYAGCGMV YSPLASTILS SLPVEESGRG CGMNDLVISV SASVGVVIFD
GILDKNMLSG NSITGASGIS SGFANISLMC AAVALLGIIV FTFRNFITKE SNAIEVNEDQ
E
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