| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0577 |
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| Symbol | |
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| ID | 8709382 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | + |
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| Start bp | 623692 |
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| End bp | 624648 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 646482686 |
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| Product | inosine-uridine preferring nucleoside hydrolase |
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| Protein accession | YP_003373813 |
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| Protein GI | 283783059 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG1957] Inosine-uridine nucleoside N-ribohydrolase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.113372 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAAGC TTATTCTTGA TTTGGATACT GGTGTTGATG ATACCTTAGC AATTTCTTAT
GCTCTTGGTA GCCCTGAGGT TGAGCTGATC GGTATTACTG GTACGTATGG CAACGTTTTA
ATGGAACAGG GCGTTCGTAA TGCTCTTGCT ATAACAGATT TATTTGGACA TCCAGAAGTT
AAAGTGTATC GTGGTTTGCC GCATGCGAGC AAGAAAGATT CGTTTGAAGT TCTGTCTATT
TCTGCATTCA TTCACGGTGA CAATGGTATT GGCGATGTTG TTATTCCAGA TTCAAAGCGT
GAAGCTGAGT CTGAGCCAGC TGTTGATTTC ATAATTGATT CAGTTAAGAC TTATGGCAAG
GATCTTATTT ATGTTCCAAC TGGTCCTATG ACAAATATTG CTGCTGCATT GCATAAGGCT
CCAGAAATCA AAGATGAAAT TGGTAAGATT GTTCTTATGG GCGGTGCTCT TACAATTCAT
GGAAATGTAA CTCCTTGGAT GGAAGCAAAT ATTTCCCAAG ATCCAGATGC AGCAGACGTC
CTATTCCGTT CTGGCGCCCC TGTAACAATG GTCGGTTTGG ATGTGACTTT GCAAACCTTG
CTTACCTATA AGGAAACGCA ACAGTGGCGT GACCTTGGTA CAAAGGCTGG CAAGTTCCTT
GCAGATATGA CCGATTTTTA CATTAAGGCA TATGAAACAA CGGCTCCACA CCTTGGTGGC
TGCGGTTTGC ACGATCCGTT GGCTGTTGCA GTTGCTGTTG ACCCAACGCT TGTTACAACT
CTACCAATCA ACATGCAGGT AGATGTTGAA GGCCCAACTC GTGGACGCAC AATTGGTGAT
GTTACGCGCT TGAATGACCC TGTTAAAACA ATGCAAGTTG CTGTTGGTGT TGATGTTCCA
CGATTCTTGA ACGAGTTTAT GACGCGCATT TCTGGCTTGG CAAAAATCGC TGGATGA
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| Protein sequence | MKKLILDLDT GVDDTLAISY ALGSPEVELI GITGTYGNVL MEQGVRNALA ITDLFGHPEV
KVYRGLPHAS KKDSFEVLSI SAFIHGDNGI GDVVIPDSKR EAESEPAVDF IIDSVKTYGK
DLIYVPTGPM TNIAAALHKA PEIKDEIGKI VLMGGALTIH GNVTPWMEAN ISQDPDAADV
LFRSGAPVTM VGLDVTLQTL LTYKETQQWR DLGTKAGKFL ADMTDFYIKA YETTAPHLGG
CGLHDPLAVA VAVDPTLVTT LPINMQVDVE GPTRGRTIGD VTRLNDPVKT MQVAVGVDVP
RFLNEFMTRI SGLAKIAG
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