| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0547 |
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| Symbol | |
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| ID | 8708839 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | + |
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| Start bp | 590708 |
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| End bp | 591964 |
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| Gene Length | 1257 bp |
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| Protein Length | 418 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 646482658 |
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| Product | transporter, dicarboxylate/amino acid:cation (Na+ or H+) symporter (DAACS) family protein |
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| Protein accession | YP_003373785 |
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| Protein GI | 283783031 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3633] Na+/serine symporter |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.0000000160767 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGCACAAGA TTGTTCAAAA ATGGAATAAC ATTGACCTTA TTTTACGCAT TGTAATTGGT
CTTTTTCTCG GTGCTGTGCT TGGTATTTTT GTGCCAGCTC ACGTCTATGT GCTAGATCTT
ATGGGGAAGC TTTTTGTCAG TGCGCTTAAA TCTGTTGCGC CAATTTTGGT ATTTTGCCTA
GTTATTGGTG CACTTGCGCA AGCAAAAAGT GTTGGCAACA TGAAAGTGGT AATAGGGCTG
TACGCGCTAT CTACGTTTAC TGCAAGCCTT GTAGCTGTAT GTGCGGCTAT GATTTTCCCT
GTTGATTTTA CTTTTGCTCA TGTTGCAGCA GCGTCTTCGC CGTCTCCTCA AGGAATTGGT
GAGGTGCTTA ATTCACTTGT GCTAAATATT GTTGTTAATC CTGTAGATGC TCTCGTTAAA
GGTAACTTTA TTGGTATCCT TTTCTGGGCG ATTGCTTTCG GTGTTGCGTT ACGCTTGGCT
GAGCCTTCTA CCAAAGCATT TTTCGATAAC GTTTCGTCTG CTATTGGAAA AATTGTCCAC
TGGATTATTA ACGCAGCACC TTTTGGCATT ATGGGTCTTG TTTATACAAC AGTTGCAAGT
AATGGTCTTC GTATTTTTAG TGAGTATGGT TTCGTTATTG CTTTGTTAGT AGGTACTATG
GCTGTTGTTG CTTTGATTCT TAATCCTATT TTGGTTTTCG TGCTTACACG TAAGAATCCG
TATCCTCTTG TTTTTAGAAC TTTGCGCGAT TCGGGTGTTA CAGCGTTCTT CATGCGTTCT
TCTGCTGCAA ATATTCCTGT GAATATGAAT TTGTGTGAAA AACTTGGCTT TAACAAAGAT
AATTACTCTG TTTCAATACC GCTTGGCTCA ACTATTAATA TGAGCGGAGC TGCTATAACT
ATTTCTATCA TGTCTTTGTG CGCTGCTCAC ACGCTTGGTA TTCGCGTTGA TATTCCAACG
GCTGTGATTC TTTCTGTGCT TTCTGCAGTT TCTGCTGCAG GAGCATCTGG TGTAGCTGGT
GGTTCGCTTT TGCTTATACC TCTTGCATGC TCGTCGTTTG GTATTTCAAA TGATATCGCT
ATGCAAGTAG TTGCTATTGG TCTTATTATT GGCGTTATTC AGGATTCTTG CGAAACTGCA
CTTAACTCTT CCACGGATGT TCTCTTTACT GCGGTTGGCG AATATCGCAT GTGGCAGCGT
GCAGGTATTG AATTCAAAAT GGGCAAGGAT CACGAGACTG TGCAACTTAA AAAGTAG
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| Protein sequence | MHKIVQKWNN IDLILRIVIG LFLGAVLGIF VPAHVYVLDL MGKLFVSALK SVAPILVFCL
VIGALAQAKS VGNMKVVIGL YALSTFTASL VAVCAAMIFP VDFTFAHVAA ASSPSPQGIG
EVLNSLVLNI VVNPVDALVK GNFIGILFWA IAFGVALRLA EPSTKAFFDN VSSAIGKIVH
WIINAAPFGI MGLVYTTVAS NGLRIFSEYG FVIALLVGTM AVVALILNPI LVFVLTRKNP
YPLVFRTLRD SGVTAFFMRS SAANIPVNMN LCEKLGFNKD NYSVSIPLGS TINMSGAAIT
ISIMSLCAAH TLGIRVDIPT AVILSVLSAV SAAGASGVAG GSLLLIPLAC SSFGISNDIA
MQVVAIGLII GVIQDSCETA LNSSTDVLFT AVGEYRMWQR AGIEFKMGKD HETVQLKK
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