| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0533 |
|---|
| Symbol | |
|---|
| ID | 8708844 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Gardnerella vaginalis 409-05 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013721 |
|---|
| Strand | + |
|---|
| Start bp | 570996 |
|---|
| End bp | 571181 |
|---|
| Gene Length | 186 bp |
|---|
| Protein Length | 61 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 646482646 |
|---|
| Product | DNA binding domain, excisionase family |
|---|
| Protein accession | YP_003373773 |
|---|
| Protein GI | 283783019 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01764] DNA binding domain, excisionase family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.000097622 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAATG AAGAAGGCTA TATCAGCATT GATGAAGCGG CAGAATACTT GGGGATAAAA
ACTGTCACTC TGAGAACCTG GATAAGAAAA AAACCAGATA TGCCAGTATA TAAAATAGGA
AAACTTTGGA AATTTAAACG CTCGGAATTA GATAAATGGA TTGCCAGTGG AGAAAGTGCA
GAGTAG
|
|---|
| Protein sequence | MKNEEGYISI DEAAEYLGIK TVTLRTWIRK KPDMPVYKIG KLWKFKRSEL DKWIASGESA
E
|
|---|
| |