| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0518 |
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| Symbol | |
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| ID | 8709679 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | + |
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| Start bp | 559651 |
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| End bp | 559947 |
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| Gene Length | 297 bp |
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| Protein Length | 98 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 646482632 |
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| Product | putative toxin-antitoxin system, antitoxin component, ribbon-helix-helix domain protein |
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| Protein accession | YP_003373759 |
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| Protein GI | 283783005 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3077] DNA-damage-inducible protein J |
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| TIGRFAM ID | [TIGR02384] addiction module antitoxin, RelB/DinJ family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.00235093 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCGAAAA CAGCTAACTT GTATACTCGT ATTGATCCAG AGTTAAAAGA GCAGGCAGAG
TATATATTGA ATTCTTTGGG TCTTCCTCCT TCGAGTGCTA TTACCATGTT TTATAAGCAG
GTTGTTTTGC AGCAGGGGCT TCCTTTTGAT GTGAAATTGG GTTATAGAGA GCCGCGTGAT
GTGAGTTCTA TGACTCAAGG TGAGTTGAAT GATGAGTTGG AAAAGGGTTA TAAGTCAGTT
TTATCTGGTG ATGTGAAGCC TGCGGATAAG GTTTTTGAGT CCTTGCATAA GGCATAG
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| Protein sequence | MAKTANLYTR IDPELKEQAE YILNSLGLPP SSAITMFYKQ VVLQQGLPFD VKLGYREPRD
VSSMTQGELN DELEKGYKSV LSGDVKPADK VFESLHKA
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