| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0508 |
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| Symbol | |
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| ID | 8709031 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | + |
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| Start bp | 551842 |
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| End bp | 552117 |
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| Gene Length | 276 bp |
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| Protein Length | 91 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 646482622 |
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| Product | toxin-antitoxin system, toxin component, RelE family |
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| Protein accession | YP_003373749 |
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| Protein GI | 283782995 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3041] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR00053] addiction module toxin component, YafQ family
[TIGR02385] addiction module toxin, RelE/StbE family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0213724 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTAAAC CGCCATTTTA TAGTCCAATC TATCTGCGAG ATGTTAAGAA ATATAAGCAG
AAGCATTACG ATATTGAGCA AGTAATCAAT ATTGTAAGAC TTATTTGCAA TGGTGCAGAT
TCTCGCGAAC TTGCAACTTA TAGAGATCAT ATTCTTAAAG GCTCATATAA AGGCGTGCAT
GAATTGCATG TGTCTGCAGA TGTTCTACTG TTGTATCAAG TTAAAGAAGA TTGCATTATA
TTTCTACGCT TAGGATCTCA CGACGACTTA TTCTAG
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| Protein sequence | MPKPPFYSPI YLRDVKKYKQ KHYDIEQVIN IVRLICNGAD SRELATYRDH ILKGSYKGVH
ELHVSADVLL LYQVKEDCII FLRLGSHDDL F
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