| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0500 |
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| Symbol | |
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| ID | 8709989 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | + |
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| Start bp | 547461 |
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| End bp | 547754 |
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| Gene Length | 294 bp |
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| Protein Length | 97 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 646482614 |
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| Product | hypothetical protein |
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| Protein accession | YP_003373741 |
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| Protein GI | 283782987 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.158797 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGATCATA TTCCAAAATG GATGGCTAAT CTCACAGATG AAGATATGTC GTTTATAAAG
AACTTTGTAT TATCGTCTGG GTCGTTAAAA GAAATGTCGC AAATGTATCA AGTCTCTTAC
CCAACGATGA GAATCAGGCT TAACAGGCTT ATTGAAAAAC TGCGCATAAG CGACAATGAA
CCAGAAGATC CGTTCGTTCT TTTGGTAAAG AGTCTTGCTA TTGACGATAA ATACGATGTT
GACACAGCTC GAACACTCAT AAACGAATAT AGAAAAAGGA AGGATGAATC ATGA
|
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| Protein sequence | MDHIPKWMAN LTDEDMSFIK NFVLSSGSLK EMSQMYQVSY PTMRIRLNRL IEKLRISDNE
PEDPFVLLVK SLAIDDKYDV DTARTLINEY RKRKDES
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