| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0468 |
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| Symbol | |
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| ID | 8709676 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | - |
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| Start bp | 513207 |
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| End bp | 513986 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 646482583 |
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| Product | exonuclease |
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| Protein accession | YP_003373710 |
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| Protein GI | 283782956 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAACTC ATATTCAAGA ATTGTTAAAT GCTTTAGATT TAGCACCTAA GCAAGATGAG
AATACATTAC TTGCTGAATC ATGGTTACTT GGTTTCGACA CTGAAACTAC AGGTGCAAAT
ATTGGTAAAG ATGCCATTGT TTCTGCAACT CTAGTATTAC GCAATCCTGA ACTAGCTCAC
ACTGGAGATG TGGTATCAAC TTGGTTAATT AACCCTCATC AGCCTATGAA TCCTAAAGCA
AGCGAAGTAA ATGGTTTCAC AGATGAATAC CTCAAAGAAC ACGGCGGAGA GCCTGAAGAA
GAACTTGAAT TCCTTGCACG TGCAGTAAGC ATGGCTCAAG CTAAGAATAT TCCACTACTT
GCTTATAACG CTCCATTTGA TATTGCAATG TTACGTCACG ACTTGAAGCA TTGGCATCTT
ACTGCGCTAG AAGAACGCGC AACTTGTCCA ATACATGCAC TAAACGCTAA TGACATTCTT
ACTGTTGACC CTCTTGTTAT CGATAGGGCT GTTTCTAGAA GATCCGGCAA GCGTACTCTC
ACTATTACAT CTCAGTTTTA CGGGGTTGAA CCAATCGGAG ATTTCCACGA TGCTACAGCA
GACACAGTTG CAGCTCTTGA TTTGATTGCT CCAATGAGCA AACTATATGA GTCAGTAAGT
TGCATGAGGC TGAATACTAT GATGGATTGG CAGCGCGAAG CTTATATTAA TTGGCGAGAT
AGCTTCAATC AATGGCTGCA ATCTCACGGA CGTGAGCCTA TTACTGGAAC ATGGCTATAA
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| Protein sequence | MPTHIQELLN ALDLAPKQDE NTLLAESWLL GFDTETTGAN IGKDAIVSAT LVLRNPELAH
TGDVVSTWLI NPHQPMNPKA SEVNGFTDEY LKEHGGEPEE ELEFLARAVS MAQAKNIPLL
AYNAPFDIAM LRHDLKHWHL TALEERATCP IHALNANDIL TVDPLVIDRA VSRRSGKRTL
TITSQFYGVE PIGDFHDATA DTVAALDLIA PMSKLYESVS CMRLNTMMDW QREAYINWRD
SFNQWLQSHG REPITGTWL
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