| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0453 |
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| Symbol | |
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| ID | 8709174 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | - |
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| Start bp | 497092 |
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| End bp | 497457 |
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| Gene Length | 366 bp |
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| Protein Length | 121 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 646482568 |
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| Product | hypothetical protein |
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| Protein accession | YP_003373697 |
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| Protein GI | 283782943 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0011] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00106] uncharacterized protein, MTH1187 family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.709089 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTGAAA ATAATAACGA GAATACAAAC GACCACATGA ACGAGCACAG AACTAACACG
GTCGCGGCGT TGTGCATTGC TCCAAGCGGA GTCGGAGACG AGTTGAGCGA GTACGTGGCA
GATGCCGTAC AAGTAATTCG CGATTCTGGA TTAAAGAACG AAACTAACGC AATGTTTACG
AATATTGAGG GCGAATTTGA TGACGTTATG CGCGTTGTGA AAGATGCTAC GATGACTTTA
GTTAGTAAAG GATACCGTAC TGGAGTAATA CTAAAATTAG ATATTCGCCC TGGTTTTAGC
AATCAAATTG ACGCAAAAAG TGCGCTTGTA GATAAGATTC TCGACGAACG AAATAAAGAA
GAATAA
|
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| Protein sequence | MSENNNENTN DHMNEHRTNT VAALCIAPSG VGDELSEYVA DAVQVIRDSG LKNETNAMFT
NIEGEFDDVM RVVKDATMTL VSKGYRTGVI LKLDIRPGFS NQIDAKSALV DKILDERNKE
E
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