| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0443 |
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| Symbol | |
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| ID | 8710011 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | - |
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| Start bp | 485648 |
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| End bp | 485866 |
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| Gene Length | 219 bp |
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| Protein Length | 72 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 646482558 |
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| Product | hypothetical protein |
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| Protein accession | YP_003373688 |
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| Protein GI | 283782934 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00010542 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGCGAGTTG TTTTAGGAGT AAAAAACGTT TCTGATTCCA TCGATTTTGA AACCAACCAA
AGCGCAGAAG AAGTGCGCAA AGTGATTAAC GATTCCAAAG ATATGCTTGA GTTTACGGAC
GTAAATGGGC GCACTATTAT GGTCTCAGCT TCGTCGCTGT CTTACGCACT CATCGGCGAT
ACGCCAAAGC ATTCAGTAGG CTTCGGAGCA CTCAACTAA
|
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| Protein sequence | MRVVLGVKNV SDSIDFETNQ SAEEVRKVIN DSKDMLEFTD VNGRTIMVSA SSLSYALIGD
TPKHSVGFGA LN
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