| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0406 |
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| Symbol | |
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| ID | 8708910 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | + |
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| Start bp | 435437 |
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| End bp | 435991 |
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| Gene Length | 555 bp |
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| Protein Length | 184 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 646482522 |
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| Product | low molecular weight phosphotyrosine protein phosphatase |
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| Protein accession | YP_003373655 |
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| Protein GI | 283782901 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0394] Protein-tyrosine-phosphatase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGAAG AATCAAGCAA AATCAAGGTC GACGCGCGTC ACCCATATAC CGTTATGACG
GTTTGCACAG GCAATATTTG TCGCTCGCCA ATGGCGGAAA TCGTGTTGCG CAACGAGTTT
CAATTGAGGG GATTGGGCGA CGTCGTTGCT GTGCGTTCCA GCGGTGTAAG CGACGAAGAG
TATGGCAATC CGATTGATCG CCGCGCGCAA AGGGAATTAA CTAAGCGCGG ATACAGGCTT
CCTGCTTCGC ATTTTGCGCA TCGAATTGAA GCGGATGAGA TTGCGGAAAC GAACCTGTTT
TTGCCTATGA CGGCTTCGCA TATGCACTCG CTTTTGCGTT TGTTGCCGCC GCAAAAGCGC
GAACTTGTGC ACATGTACCG CGCGTTTGAT CCATCGATTC CTAAGCCGCA GCCTGGTCGC
GAGATGTTGC TTGACTTGGC TGATCCGTGG TACGGAGGTC CTCGCGAGTT CGAAGTTGCG
ATGGATCAGG TTGAGCAGTG CGCACCTTAT ATCGTCGATT GGGTTGCCGC GCGCATTGAG
AGGGCTGACC GCTAA
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| Protein sequence | MTEESSKIKV DARHPYTVMT VCTGNICRSP MAEIVLRNEF QLRGLGDVVA VRSSGVSDEE
YGNPIDRRAQ RELTKRGYRL PASHFAHRIE ADEIAETNLF LPMTASHMHS LLRLLPPQKR
ELVHMYRAFD PSIPKPQPGR EMLLDLADPW YGGPREFEVA MDQVEQCAPY IVDWVAARIE
RADR
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