| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0402 |
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| Symbol | |
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| ID | 8708961 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | - |
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| Start bp | 431803 |
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| End bp | 433134 |
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| Gene Length | 1332 bp |
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| Protein Length | 443 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 646482518 |
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| Product | glycosyltransferase, group 1 family protein |
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| Protein accession | YP_003373651 |
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| Protein GI | 283782897 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0438] Glycosyltransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCGCAATA ATGACGCTAC GCATGCATGT ATGCAACCGG AGGAAACTTT GAAAATCGCT
ATTTTTACAG AAACGTATCC ACCGTACATA AATGGCGTCG CAACACAGTC TTACATGCTC
AAAAAGATGT ATGAAGAGCT CGGGCATGAA GTGCTAGTAG TCACGGTCGG CTCCGAAAAA
CAGCGCAAAA CCAAGCTTGA AGATGGAGTT GTTTACGTTC CAGGCATATT GCTTAAAAAG
CTTTACAAAT ACCGCGTTGC CCTTCCGATT GGTCACATGC GAAAGCAGCT GCCGCTTAAA
TTTAAGCCGG ACGTTATTCA TATTCAAAAC GAATTTGGTA TTGGCGAAAT CGGCTTGGAA
GTAGCAAAAA AAGAGCATAT TCCCGTTATT TATACGCTTC ACACGGAATA CGATAAATTC
CTGTTTTACA TTGGCTTAAA GCATTTTACT GAGTTCTCTC GCAATATTTC GGCGAAATAT
TTTATGCGAT TCTCGAAAAA TGCCACAATT ATTACGAGCA TGTCTCCTAA AGCACAGGCA
TATATTGACC GTCAGAAGGT TGATAAAAAA GTGATTGTGC TGAATAACGC TGTGGAATAT
AAAAAGTTCC TACCAACACC TGAACGACTT GCATTCCGCA AAGCTTTCCG CGAAAAATAT
GGCGTTTCTG ACTCTACTAA GCTGTTTGTT TTCGTTGGTA GAATCGGTGC TGAAAAAAAT
ATTTCAGAAT TAATTGACAA CTTTATGTAT TGCGATTTTC CTCGCGAAAA AGCGCGCTTA
TTTGTTATTG GCGGCGGTCC TGATTTGGAA TCGTTGCGCA AGCGCGTGGC AGATAATGGT
TTTGACGACA GAATTTGCTT GCTTGGGCCT ATTGCTCACA CGGAAATTCC AAAGTATTTG
CACGCAATGG ACTACTACAC AACCGCATCA CTTTCCGAAA TGCACTCACT TTCGATGTTA
GAAGCAATGG CTTCCGGTCT GTTTGCGCTT GTAAAGCATG ATGTACCGAA TGAGAAGCAG
ATTATCAGCG GTCAAAACGG GTATCAGTGG GATACTAAGG AAGATTTTAA AACTGTTTTT
AGTAAAGTTT TGAATATGAG CGAGACTGAG CAGGCTCAGC TTAAGGCGAA CGTGCTCGAG
TATTCGAAAA ATAACGATTT TAAGAGCCAA GCACTTGAGC TGCTTAAGAT TTACAAGCGC
GCAATCGAGA TGAACAAAGA GAAGCTCGCT GAAAAGAAAG CTAAGCGAGA TGCCAGACGC
GCGCGTTTTA TGCTGAAAAA GCGCGAGAAT ACTGAAGCGG AGTCGCAAGA GCCGCAAAAG
CCGCAAGACT AG
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| Protein sequence | MRNNDATHAC MQPEETLKIA IFTETYPPYI NGVATQSYML KKMYEELGHE VLVVTVGSEK
QRKTKLEDGV VYVPGILLKK LYKYRVALPI GHMRKQLPLK FKPDVIHIQN EFGIGEIGLE
VAKKEHIPVI YTLHTEYDKF LFYIGLKHFT EFSRNISAKY FMRFSKNATI ITSMSPKAQA
YIDRQKVDKK VIVLNNAVEY KKFLPTPERL AFRKAFREKY GVSDSTKLFV FVGRIGAEKN
ISELIDNFMY CDFPREKARL FVIGGGPDLE SLRKRVADNG FDDRICLLGP IAHTEIPKYL
HAMDYYTTAS LSEMHSLSML EAMASGLFAL VKHDVPNEKQ IISGQNGYQW DTKEDFKTVF
SKVLNMSETE QAQLKANVLE YSKNNDFKSQ ALELLKIYKR AIEMNKEKLA EKKAKRDARR
ARFMLKKREN TEAESQEPQK PQD
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