| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0384 |
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| Symbol | sufD |
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| ID | 8709883 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | + |
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| Start bp | 413872 |
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| End bp | 415119 |
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| Gene Length | 1248 bp |
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| Protein Length | 415 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 646482500 |
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| Product | FeS assembly protein SufD |
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| Protein accession | YP_003373634 |
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| Protein GI | 283782880 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0719] ABC-type transport system involved in Fe-S cluster assembly, permease component |
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| TIGRFAM ID | [TIGR01981] FeS assembly protein SufD, group 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGAAG ATTTAAAAGA GAATTTAGGC AATAAAATGA CGGAAAAAGA AATTAATATT
CCTATAGCAG ACCCTAATGA TCCGTATGCG GTTCCTGCAG CAATGCCTTC TAGCGCAGAT
AAATCCGTGC GCTCGTTTAA TGTGGAAGAT TTTGCGATTC CAACTAGAAA GCAAGAAGAT
TGGCGATATA CTCCAGTTGA GCGAATTTCC GAGTTTTTCG AGCGTTTTGA ACCATCTAAT
AGTATTCAAG TAACTCTTGA AGGTGTTGGT GGAGCTGCAT TGGATGATTC TTACGTTGGT
AGCGACGGTT CCGTAAGTTT GCAAGTAAAG CCGAAAAACG AGGCTCCTCA TACCGATATG
AAGCCGTCTG ATCGCGTAGC TGCAGTCGCG TGGAATACAG CGAAATCTGC ATACGTGCTT
CACGTATCTG GCGAAATCAA AAAGCCAATC GTACTGAAAA TTCAGGGTGA TAATGTTAAT
ACGCTTGACG CATTGCACTT AGTAATCGAA GCGGATTCTC GCTCGAATGC TGACATTATT
ATCGAACATA CCGGCTGCGC AAAACTTGCT GAAGGTGTGG AAATCATCCT CGGAAAGCAC
GCGCACGTTT CTACTACCTT TATTCAAGAG TGGGATTCGG GCAGTAAACA CGTTGGAAAT
CAGCGTATTC ACGTTGGTGA GGGAGCTTCG CTTCGCCACA CGATGGTCAC TCTTGGCGGA
AATGTTGTGC GCATTCGCAT GGATCAGGAT TTTGGCGGCG AACAGGGTGA TTTGAACATG
CTCGGCATGT ATTTTGTGGA TCCAGGCGAG CATGTTGAGC ACCGCACGAT GGTTGTGCAC
AACTATCCAG AATGCAAGTC GCGAGTAGTG TATAAAGGTG CCTTGGAAGG AAAGGGCGCG
CATTCGACTT GGGTTGGAAA CGCGCTTATT AAGCCGGAAG CTCCTGGCAC GGATTCGTAC
GAGTTGAACC GTAATTTAGT GCTCACTCCT GGAGCAATCG CCGATTCTGA GCCGAATTTG
GAAATTGAAA ACGGAAATAT TATTGGTGCC GGTCACGCAA GTTCAGTCGG CAGATTTGAC
GACGAAGAGC TTTTCTACTT GCAGTCGCGC GGAGTTAGTG AGGTTGAGGC TCGAAAGCTT
GTTGTGCGCG GATTCTTTAA CGAGCTGATT GAGGAAATTG GCGTTCCGGA AATTGTTGAT
CACTTAATGA AGGCGATTGA GCGCCGTCTT GCAAGAACGG AAGAATAG
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| Protein sequence | MSEDLKENLG NKMTEKEINI PIADPNDPYA VPAAMPSSAD KSVRSFNVED FAIPTRKQED
WRYTPVERIS EFFERFEPSN SIQVTLEGVG GAALDDSYVG SDGSVSLQVK PKNEAPHTDM
KPSDRVAAVA WNTAKSAYVL HVSGEIKKPI VLKIQGDNVN TLDALHLVIE ADSRSNADII
IEHTGCAKLA EGVEIILGKH AHVSTTFIQE WDSGSKHVGN QRIHVGEGAS LRHTMVTLGG
NVVRIRMDQD FGGEQGDLNM LGMYFVDPGE HVEHRTMVVH NYPECKSRVV YKGALEGKGA
HSTWVGNALI KPEAPGTDSY ELNRNLVLTP GAIADSEPNL EIENGNIIGA GHASSVGRFD
DEELFYLQSR GVSEVEARKL VVRGFFNELI EEIGVPEIVD HLMKAIERRL ARTEE
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